ATTED-II : GeneID search result

[←][→] ath AT4G24260 Gene

functional annotation

Function

glycosyl hydrolase 9A3

GO BP

GO:0030245 [list] [network] cellulose catabolic process	(25 genes)	IEA
GO:0009624 [list] [network] response to nematode	(84 genes)	IEP
GO:0071555 [list] [network] cell wall organization	(538 genes)	IEA

GO CC

GO:0005886 [list] [network] plasma membrane	(3771 genes)	IDA
GO:0016021 [list] [network] integral component of membrane	(4803 genes)	IEA
GO:0005634 [list] [network] nucleus	(10793 genes)	ISM

GO MF

GO:0008810 [list] [network] cellulase activity

(26 genes)

IEA

KEGG

ath00500 [list] [network] Starch and sucrose metabolism (165 genes)

Protein

NP_001329770.1 NP_001329771.1 NP_194157.1

BLAST

NP_001329770.1 NP_001329771.1 NP_194157.1

Orthologous

[Ortholog page] Cel3 (sly) GH9A1 (ath) LOC4332724 (osa) LOC4334029 (osa) LOC7491486 (ppo) LOC11412111 (mtr) CEL12 (gma) LOC100274698 (zma) LOC100281146 (zma) LOC100285405 (zma) LOC100501706 (zma) LOC100793289 (gma) LOC100794019 (gma) LOC100804055 (gma) LOC101244370 (sly) LOC103848388 (bra) LOC103858416 (bra) LOC103861475 (bra) LOC103861904 (bra) LOC109123547 (vvi)

Subcellular
localization
wolf

nucl 7, E.R. 1, cyto 1, vacu 1, E.R._plas 1	(predict for NP_001329770.1)
nucl 6, cyto 1, vacu 1, E.R. 1, E.R._vacu 1, cyto_E.R. 1	(predict for NP_001329771.1)
nucl 4, E.R. 2, cysk_nucl 2, cyto 1, E.R._vacu 1, E.R._plas 1	(predict for NP_194157.1)

Subcellular
localization
TargetP

other 9	(predict for NP_001329770.1)
other 9	(predict for NP_001329771.1)
other 9	(predict for NP_194157.1)

Gene coexpression

Network^*for
coexpressed
genes

Coexpressed
gene list

[Coexpressed gene list for GH9A3]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

254146_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

254146_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

254146_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	828527
Refseq ID (protein)	NP_001329770.1
	NP_001329771.1
	NP_194157.1

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