[←][→] ath   At4g24270 Gene
functional annotation
Function   EMBRYO DEFECTIVE 140    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0006396 [list] [network] RNA processing  (567 genes)  IEA  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (697 genes)  NAS  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA ISM  
GO MF
GO:0017070 [list] [network] U6 snRNA binding  (1 genes)  IDA  
GO:0003676 [list] [network] nucleic acid binding  (3100 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001328782.1  NP_001328783.1  NP_194158.3  NP_849551.1 
BLAST NP_001328782.1  NP_001328783.1  NP_194158.3  NP_849551.1 
Orthologous [Ortholog page] LOC4344498 (osa)  LOC18098375 (ppo)  LOC25500419 (mtr)  LOC100794881 (gma)  LOC100801333 (gma)  LOC101254341 (sly)  LOC103861930 (bra)  LOC123147583 (tae)  LOC123156255 (tae)  LOC123169772 (tae)  LOC123408517 (hvu) 
Subcellular
localization
wolf
nucl 6,  cyto 2,  chlo 1,  vacu 1  (predict for NP_001328782.1)
nucl 6,  cyto 2,  chlo 1,  vacu 1  (predict for NP_001328783.1)
nucl 9  (predict for NP_194158.3)
nucl 9  (predict for NP_849551.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001328782.1)
other 9  (predict for NP_001328783.1)
other 9  (predict for NP_194158.3)
other 9  (predict for NP_849551.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 5
ath03015 mRNA surveillance pathway 3
ath03008 Ribosome biogenesis in eukaryotes 2
Genes directly connected with EMB140 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
10.4 AT2G21440 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 816683
8.7 AT2G05120 Nucleoporin, Nup133/Nup155-like protein [detail] 815060
8.7 SAR1 SUPPRESSOR OF AUXIN RESISTANCE1 [detail] 840234
7.0 NUFIP GATA zinc finger protein [detail] 831962
Coexpressed
gene list		 [Coexpressed gene list for EMB140]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
254147_at
254147_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
254147_at
254147_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
254147_at
254147_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 828529      
Refseq ID (protein) NP_001328782.1 
NP_001328783.1 
NP_194158.3 
NP_849551.1 


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