ATTED-II : GeneID search result

[←][→] ath At4g24660 Gene

functional annotation

Function

homeobox protein 22

Plant GARDEN Plant GARDEN JBrowse

GO BP

GO:0009793 [list] [network] embryo development ending in seed dormancy

(697 genes)

IMP

GO CC

GO:0005634 [list] [network] nucleus

(10305 genes)

ISM ISS

GO MF

GO:0042803 [list] [network] protein homodimerization activity	(227 genes)	IDA ISS
GO:0003677 [list] [network] DNA binding	(1277 genes)	ISS
GO:0005515 [list] [network] protein binding	(5066 genes)	IPI

KEGG

Protein

NP_001328716.1 NP_194197.1

BLAST

NP_001328716.1 NP_194197.1

Orthologous

[Ortholog page] HB21 (ath) HB24 (ath) HB34 (ath) HB30 (ath) HB23 (ath) HB26 (ath) HB25 (ath) HB31 (ath) ZFHD1 (ath) LOC4339713 (osa) LOC4345673 (osa) LOC4345845 (osa) LOC4347054 (osa) LOC4347315 (osa) LOC4350177 (osa) LOC4351766 (osa) LOC7460689 (ppo) LOC7463056 (ppo) LOC7467187 (ppo) LOC7467413 (ppo) LOC7468872 (ppo) LOC7472590 (ppo) LOC7473187 (ppo) LOC7477614 (ppo) LOC7479741 (ppo) LOC7492939 (ppo) LOC7495973 (ppo) LOC11405810 (mtr) LOC11407679 (mtr) LOC11410439 (mtr) LOC11413632 (mtr) LOC11422400 (mtr) LOC11423707 (mtr) LOC11427388 (mtr) LOC11435175 (mtr) LOC18096609 (ppo) LOC18098374 (ppo) LOC18099272 (ppo) LOC18104419 (ppo) LOC25484510 (mtr) LOC100776421 (gma) LOC100781241 (gma) LOC100781788 (gma) LOC100782326 (gma) LOC100785050 (gma) LOC100786999 (gma) LOC100788836 (gma) LOC100789367 (gma) LOC100789447 (gma) LOC100789893 (gma) LOC100793926 (gma) LOC100794438 (gma) LOC100795063 (gma) LOC100798992 (gma) LOC100800005 (gma) LOC100801455 (gma) LOC100801990 (gma) LOC100803037 (gma) LOC100805652 (gma) LOC100808910 (gma) LOC100810719 (gma) LOC100811041 (gma) LOC100814730 (gma) LOC100814924 (gma) LOC100817446 (gma) LOC100820567 (gma) LOC101246239 (sly) LOC101247612 (sly) LOC101255246 (sly) LOC101261565 (sly) LOC101267309 (sly) LOC101268060 (sly) LOC101268347 (sly) LOC101268680 (sly) LOC102660309 (gma) LOC103834899 (bra) LOC103837039 (bra) LOC103837578 (bra) LOC103837853 (bra) LOC103842967 (bra) LOC103846431 (bra) LOC103852596 (bra) LOC103853989 (bra) LOC103855300 (bra) LOC103856558 (bra) LOC103862371 (bra) LOC103863915 (bra) LOC103872237 (bra) LOC103873973 (bra) LOC103875120 (bra) LOC104647583 (sly) LOC123074237 (tae) LOC123077678 (tae) LOC123082337 (tae) LOC123086753 (tae) LOC123091228 (tae) LOC123096213 (tae) LOC123098097 (tae) LOC123103890 (tae) LOC123104027 (tae) LOC123112118 (tae) LOC123112256 (tae) LOC123121651 (tae) LOC123121775 (tae) LOC123157942 (tae) LOC123177626 (tae) LOC123182313 (tae) LOC123398257 (hvu) LOC123398911 (hvu) LOC123420622 (hvu) LOC123424649 (hvu) LOC123447836 (hvu)

Subcellular
localization
wolf

nucl 5, mito 2, chlo 1, mito_plas 1	(predict for NP_001328716.1)
nucl 4, chlo 2, mito 2, chlo_mito 2, cysk_nucl 2	(predict for NP_194197.1)

Subcellular
localization
TargetP

other 9	(predict for NP_001328716.1)
other 9	(predict for NP_194197.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	2

Genes directly connected with HB22 on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
6.3	HB25	homeobox protein 25	[detail]	836666
4.7	HB34	homeobox protein 34	[detail]	822527
4.4	PIL5	phytochrome interacting factor 3-like 5	[detail]	816538

Coexpressed
gene list

[Coexpressed gene list for HB22]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

254132_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

254132_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

254132_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	828568
Refseq ID (protein)	NP_001328716.1
Refseq ID (protein)	NP_194197.1

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