[←][→] ath   At4g25630 Gene
functional annotation
Function   fibrillarin 2    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0001510 [list] [network] RNA methylation  (28 genes)  IGI  
GO:0006364 [list] [network] rRNA processing  (169 genes)  IGI  
GO CC
GO:0016592 [list] [network] mediator complex  (43 genes)  IDA  
GO:0005730 [list] [network] nucleolus  (387 genes)  HDA IDA IMP  
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0030515 [list] [network] snoRNA binding  (3 genes)  ISS  
GO:0004540 [list] [network] ribonuclease activity  (121 genes)  IDA  
GO:0003729 [list] [network] mRNA binding  (1535 genes)  IDA  
GO:0003723 [list] [network] RNA binding  (1729 genes)  IDA  
KEGG ath03008 [list] [network] Ribosome biogenesis in eukaryotes (96 genes)
Protein NP_567724.1 
BLAST NP_567724.1 
Orthologous [Ortholog page] FIB1 (ath)  AT5G52490 (ath)  LOC4331181 (osa)  LOC7473260 (ppo)  LOC7474066 (ppo)  LOC7484920 (ppo)  LOC9266224 (osa)  LOC11440720 (mtr)  LOC25496400 (mtr)  LOC100788688 (gma)  LOC100789137 (gma)  LOC100797625 (gma)  LOC100814656 (gma)  LOC101261490 (sly)  LOC103834862 (bra)  LOC103852096 (bra)  LOC103861582 (bra)  LOC103863368 (bra)  LOC123129055 (tae)  LOC123139921 (tae)  LOC123146227 (tae)  LOC123159877 (tae)  LOC123165498 (tae)  LOC123404338 (hvu)  LOC123407385 (hvu) 
Subcellular
localization
wolf
chlo 4,  pero 4,  cyto 2,  chlo_mito 2  (predict for NP_567724.1)
Subcellular
localization
TargetP
mito 6,  other 5  (predict for NP_567724.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 5
ath03010 Ribosome 3
ath00230 Purine metabolism 2
Genes directly connected with FIB2 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
14.8 RACK1C_AT receptor for activated C kinase 1C [detail] 821338
14.5 HDA3 histone deacetylase 3 [detail] 823605
12.9 NOP56 NOP56-like pre RNA processing ribonucleoprotein [detail] 842063
12.5 HDT4 histone deacetylase-related / HD-like protein [detail] 817331
11.0 GRP4 glycine-rich RNA-binding protein 4 [detail] 821966
10.7 PMH1 putative mitochondrial RNA helicase 1 [detail] 821800
9.9 AT3G59670 elongation factor [detail] 825136
9.8 PUR5 phosphoribosylformylglycinamidine cyclo-ligase, chloroplast / phosphoribosyl-aminoimidazole synthetase / AIR synthase (PUR5) [detail] 824667
7.9 AT5G59240 Ribosomal protein S8e family protein [detail] 836042
6.5 AT1G79470 Aldolase-type TIM barrel family protein [detail] 844285
5.9 AT3G09680 Ribosomal protein S12/S23 family protein [detail] 820125
Coexpressed
gene list		 [Coexpressed gene list for FIB2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
254080_at
254080_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
254080_at
254080_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
254080_at
254080_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 828668      
Refseq ID (protein) NP_567724.1 


The preparation time of this page was 0.3 [sec].