[←][→] ath   AT4G25730 Gene
functional annotation
Function   FtsJ-like methyltransferase family protein  
GO BP
GO:0000463 [list] [network] maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)  (13 genes)  IBA  
GO:0000466 [list] [network] maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)  (15 genes)  IBA  
GO:0031167 [list] [network] rRNA methylation  (30 genes)  IBA  
GO:0032259 [list] [network] methylation  (371 genes)  ISS  
GO CC
GO:0030687 [list] [network] preribosome, large subunit precursor  (16 genes)  IBA  
GO:0005730 [list] [network] nucleolus  (477 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0008650 [list] [network] rRNA (uridine-2'-O-)-methyltransferase activity  (2 genes)  IBA  
GO:0016435 [list] [network] rRNA (guanine) methyltransferase activity  (3 genes)  IBA  
KEGG
Protein NP_194303.2 
BLAST NP_194303.2 
Orthologous [Ortholog page] LOC4339641 (osa)  LOC7456367 (ppo)  LOC11439257 (mtr)  LOC100255646 (vvi)  LOC100381782 (zma)  LOC100784758 (gma)  LOC100790741 (gma)  LOC101249125 (sly)  LOC101253343 (sly)  LOC101253649 (sly)  LOC103635342 (zma)  LOC103834857 (bra)  LOC103861588 (bra) 
Subcellular
localization
wolf
chlo 2,  E.R. 2,  nucl 1,  plas 1,  vacu 1,  chlo_mito 1,  nucl_plas 1  (predict for NP_194303.2)
Subcellular
localization
TargetP
other 7,  mito 6  (predict for NP_194303.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 5
Genes directly connected with AT4G25730 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
18.4 AT4G16630 DEA(D/H)-box RNA helicase family protein [detail] 827364
15.1 AT2G18220 Noc2p family [detail] 816337
14.2 AT2G21440 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 816683
13.6 AT1G06720 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 837182
13.5 AT3G58660 Ribosomal protein L1p/L10e family [detail] 825035
12.7 EMB2777 Sas10/U3 ribonucleoprotein (Utp) family protein [detail] 818967
11.7 AT1G77030 putative DEAD-box ATP-dependent RNA helicase 29 [detail] 844039
10.6 NAF1 nuclear assembly factor 1 [detail] 839468
10.3 AT1G50920 Nucleolar GTP-binding protein [detail] 841514
9.4 AT1G13030 sphere organelles protein-like protein [detail] 837860
9.1 EDA7 embryo sac development arrest 7 [detail] 824866
6.9 MTA mRNAadenosine methylase [detail] 826670
Coexpressed
gene list		 [Coexpressed gene list for AT4G25730]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
254079_at
254079_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
254079_at
254079_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
254079_at
254079_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 828678      
Refseq ID (protein) NP_194303.2 


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