[←][→] ath   At4g25880 Gene
functional annotation
Function   pumilio 6      
GO BP
GO CC
GO:0005783 [list] [network] endoplasmic reticulum  (856 genes)  IDA  
GO MF
GO:0003729 [list] [network] mRNA binding  (1535 genes)  HDA IDA  
KEGG
Protein NP_001031720.1  NP_001329827.1  NP_001329828.1  NP_567733.1  NP_974618.2 
BLAST NP_001031720.1  NP_001329827.1  NP_001329828.1  NP_567733.1  NP_974618.2 
Orthologous [Ortholog page] PUM5 (ath)  LOC4346059 (osa)  LOC4347460 (osa)  LOC7490841 (ppo)  LOC11445389 (mtr)  LOC18100470 (ppo)  LOC18111187 (ppo)  LOC100780168 (gma)  LOC100811036 (gma)  LOC100819166 (gma)  LOC101263093 (sly)  LOC103859846 (bra)  LOC103861595 (bra)  LOC103863640 (bra)  LOC103869342 (bra)  LOC123104231 (tae)  LOC123112488 (tae)  LOC123121994 (tae)  LOC123151455 (tae)  LOC123157024 (tae)  LOC123170346 (tae)  LOC123399562 (hvu)  LOC123413488 (hvu) 
Subcellular
localization
wolf
nucl 6,  pero 1,  chlo 1,  cyto 1,  vacu 1  (predict for NP_001031720.1)
nucl 6,  pero 1,  chlo 1,  cyto 1,  vacu 1  (predict for NP_001329827.1)
nucl 6,  pero 1,  chlo 1,  cyto 1,  vacu 1  (predict for NP_001329828.1)
nucl 6,  pero 1,  chlo 1,  cyto 1,  vacu 1  (predict for NP_567733.1)
nucl 6,  pero 1,  chlo 1,  cyto 1,  vacu 1  (predict for NP_974618.2)
Subcellular
localization
TargetP
chlo 8,  other 3  (predict for NP_001031720.1)
chlo 8,  other 3  (predict for NP_001329827.1)
chlo 8,  other 3  (predict for NP_001329828.1)
chlo 8,  other 3  (predict for NP_567733.1)
chlo 8,  other 3  (predict for NP_974618.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
Genes directly connected with PUM6 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.4 AT5G51340 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 835208
5.5 SOG1 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein [detail] 839145
5.2 HDA05 histone deacetylase 5 [detail] 836227
Coexpressed
gene list		 [Coexpressed gene list for PUM6]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
254045_at
254045_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
254045_at
254045_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
254045_at
254045_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 828694      
Refseq ID (protein) NP_001031720.1 
NP_001329827.1 
NP_001329828.1 
NP_567733.1 
NP_974618.2 


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