ATTED-II : GeneID search result

[←][→] ath At4g26140 Gene

functional annotation

Function

beta-galactosidase 12

GO BP

GO:0006778 [list] [network] porphyrin-containing compound metabolic process	(217 genes)	IEA
GO:1903046 [list] [network] meiotic cell cycle process	(255 genes)	IEA
GO:0071695 [list] [network] anatomical structure maturation	(335 genes)	IEA
GO:1901565 [list] [network] organonitrogen compound catabolic process	(591 genes)	IEA
GO:0008610 [list] [network] lipid biosynthetic process	(657 genes)	IEA
GO:0010015 [list] [network] root morphogenesis	(669 genes)	IEA
GO:0005975 [list] [network] carbohydrate metabolic process	(844 genes)	IEA
GO:0048589 [list] [network] developmental growth	(1060 genes)	IEA
GO:0009415 [list] [network] response to water	(1079 genes)	IEA
GO:0009737 [list] [network] response to abscisic acid	(1086 genes)	IEA
GO:0044248 [list] [network] cellular catabolic process	(1086 genes)	IEA
GO:0019752 [list] [network] carboxylic acid metabolic process	(1307 genes)	IEA
GO:0009888 [list] [network] tissue development	(1806 genes)	IEA
GO:0009416 [list] [network] response to light stimulus	(1981 genes)	IEA

GO CC

GO:0009505 [list] [network] plant-type cell wall	(498 genes)	IDA
GO:0005829 [list] [network] cytosol	(2559 genes)	HDA
GO:0005576 [list] [network] extracellular region	(3154 genes)	ISM

GO MF

KEGG

Protein

NP_001329554.1 NP_001329555.1 NP_001329556.1 NP_001329557.1 NP_001329558.1 NP_001329559.1 NP_001329560.1 NP_194344.2 NP_849553.1

BLAST

NP_001329554.1 NP_001329555.1 NP_001329556.1 NP_001329557.1 NP_001329558.1 NP_001329559.1 NP_001329560.1 NP_194344.2 NP_849553.1

Orthologous

[Ortholog page] TBG3 (sly) TBG6 (sly) TBG4 (sly) TBG1 (sly) BGAL1 (ath) BGAL2 (ath) BGAL3 (ath) BGAL4 (ath) BGAL5 (ath) LOC4324191 (osa) LOC4328745 (osa) LOC4331730 (osa) LOC4341358 (osa) LOC7470014 (ppo) LOC7480151 (ppo) LOC7493931 (ppo) LOC7497590 (ppo) LOC11405663 (mtr) LOC11414214 (mtr) LOC11419221 (mtr) LOC11441599 (mtr) LOC11441981 (mtr) LOC18094855 (ppo) LOC18096747 (ppo) LOC25490234 (mtr) LOC25500443 (mtr) LOC100780897 (gma) LOC100781074 (gma) LOC100781959 (gma) LOC100785688 (gma) LOC100787084 (gma) LOC100792629 (gma) LOC100795144 (gma) LOC100798501 (gma) LOC100804103 (gma) LOC100810170 (gma) LOC100811187 (gma) LOC100814111 (gma) LOC100818981 (gma) LOC101245759 (sly) LOC101258163 (sly) LOC103833120 (bra) LOC103842580 (bra) LOC103851804 (bra) LOC103854367 (bra) LOC103856789 (bra) LOC103861613 (bra) LOC103863929 (bra) LOC103868724 (bra) LOC103870099 (bra) LOC103872148 (bra) LOC104645427 (sly) LOC106795462 (gma) LOC120577612 (mtr) LOC123061350 (tae) LOC123069989 (tae) LOC123093264 (tae) LOC123098531 (tae) LOC123127316 (tae) LOC123136993 (tae) LOC123144393 (tae) LOC123148048 (tae) LOC123159577 (tae) LOC123165480 (tae) LOC123402796 (hvu) LOC123411615 (hvu) LOC123443769 (hvu) LOC123449529 (hvu)

Subcellular
localization
wolf

vacu 3, E.R. 2, chlo 1, golg 1, E.R._plas 1	(predict for NP_001329554.1)
chlo 4, vacu 2, extr 1, golg 1, nucl 1, plas 1, nucl_plas 1	(predict for NP_001329555.1)
chlo 3, vacu 2, plas 1, E.R. 1, chlo_mito 1, E.R._plas 1	(predict for NP_001329556.1)
vacu 3, E.R. 2, chlo 1, golg 1, E.R._plas 1	(predict for NP_001329557.1)
vacu 3, chlo 2, E.R._vacu 2, plas 1, E.R. 1, E.R._plas 1	(predict for NP_001329558.1)
vacu 3, chlo 2, E.R._vacu 2, plas 1, E.R. 1, E.R._plas 1	(predict for NP_001329559.1)
chlo 3, vacu 3, E.R. 1, chlo_mito 1, nucl 1, plas 1, extr 1, golg 1, nucl_plas 1, golg_plas 1, cyto_E.R. 1	(predict for NP_001329560.1)
chlo 3, vacu 3, E.R. 1, chlo_mito 1, nucl 1, plas 1, extr 1, golg 1, nucl_plas 1, golg_plas 1, cyto_E.R. 1	(predict for NP_194344.2)
chlo 4, vacu 1, E.R. 1, golg 1, E.R._vacu 1	(predict for NP_849553.1)

Subcellular
localization
TargetP

scret 8	(predict for NP_001329554.1)
scret 8	(predict for NP_001329555.1)
scret 8	(predict for NP_001329556.1)
scret 8	(predict for NP_001329557.1)
scret 8	(predict for NP_001329558.1)
scret 8	(predict for NP_001329559.1)
scret 8	(predict for NP_001329560.1)
scret 8	(predict for NP_194344.2)
scret 8	(predict for NP_849553.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with BGAL12 on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
4.4	PRR1	pinoresinol reductase 1	[detail]	840102
4.2	AT2G22620	Rhamnogalacturonate lyase family protein	[detail]	816793
4.2	AT1G61240	lysine ketoglutarate reductase trans-splicing-like protein (DUF707)	[detail]	842417
4.0	AT5G66600	electron transporter, putative (Protein of unknown function, DUF547)	[detail]	836792

Coexpressed
gene list

[Coexpressed gene list for BGAL12]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

254015_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

254015_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

254015_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	828720
Refseq ID (protein)	NP_001329554.1
	NP_001329555.1
	NP_001329556.1
	NP_001329557.1
	NP_001329558.1
	NP_001329559.1
	NP_001329560.1
	NP_194344.2
	NP_849553.1

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