ATTED-II : GeneID search result

[←][→] ath AT4G26150 Gene

functional annotation

Function

cytokinin-responsive gata factor 1

GO BP

GO:0010151 [list] [network] chloroplast elongation	(2 genes)	IMP
GO:0043610 [list] [network] regulation of carbohydrate utilization	(2 genes)	IMP
GO:1902326 [list] [network] positive regulation of chlorophyll biosynthetic process	(6 genes)	IMP
GO:0009938 [list] [network] negative regulation of gibberellic acid mediated signaling pathway	(15 genes)	IMP
GO:0010380 [list] [network] regulation of chlorophyll biosynthetic process	(19 genes)	IMP
GO:0010187 [list] [network] negative regulation of seed germination	(23 genes)	IEP
GO:0010167 [list] [network] response to nitrate	(37 genes)	TAS
GO:0080050 [list] [network] regulation of seed development	(45 genes)	IMP
GO:0009910 [list] [network] negative regulation of flower development	(50 genes)	IMP
GO:2000028 [list] [network] regulation of photoperiodism, flowering	(63 genes)	IMP
GO:0009736 [list] [network] cytokinin-activated signaling pathway	(66 genes)	IMP
GO:0009740 [list] [network] gibberellic acid mediated signaling pathway	(71 genes)	IEP
GO:0010114 [list] [network] response to red light	(74 genes)	IEP
GO:0010029 [list] [network] regulation of seed germination	(84 genes)	IMP
GO:0009735 [list] [network] response to cytokinin	(102 genes)	IEP
GO:0007623 [list] [network] circadian rhythm	(111 genes)	IEP
GO:0090693 [list] [network] plant organ senescence	(117 genes)	IMP
GO:0009739 [list] [network] response to gibberellin	(154 genes)	IEP
GO:0009658 [list] [network] chloroplast organization	(194 genes)	IMP
GO:0009733 [list] [network] response to auxin	(407 genes)	IEP
GO:0009416 [list] [network] response to light stimulus	(700 genes)	IEP
GO:0006355 [list] [network] regulation of transcription, DNA-templated	(1984 genes)	IEA
GO:0010468 [list] [network] regulation of gene expression	(2484 genes)	IDA

GO CC

GO:0005634 [list] [network] nucleus

(10793 genes)

IMP ISM

GO MF

GO:0008270 [list] [network] zinc ion binding	(554 genes)	IEA
GO:0043565 [list] [network] sequence-specific DNA binding	(796 genes)	IEA
GO:0044212 [list] [network] transcription regulatory region DNA binding	(871 genes)	IDA
GO:0003700 [list] [network] DNA-binding transcription factor activity	(1599 genes)	ISS
GO:0005515 [list] [network] protein binding	(4605 genes)	IPI

KEGG

Protein

NP_194345.1

BLAST

NP_194345.1

Orthologous

[Ortholog page] GNC (ath) LOC7470700 (ppo) LOC11439186 (mtr) LOC25494244 (mtr) LOC100247474 (vvi) LOC100261004 (vvi) LOC100780875 (gma) LOC100792098 (gma) LOC100810090 (gma) LOC100810698 (gma) LOC101262132 (sly) LOC101268354 (sly) LOC103845114 (bra) LOC103851805 (bra) LOC103856792 (bra) LOC103861615 (bra) LOC103865903 (bra)

Subcellular
localization
wolf

nucl 10

(predict for NP_194345.1)

Subcellular
localization
TargetP

other 7, chlo 3

(predict for NP_194345.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	2

Genes directly connected with CGA1 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
9.6	GNC	GATA type zinc finger transcription factor family protein	[detail]	835788
6.9	ZFP8	zinc finger protein 8	[detail]	818794
5.4	TCP5	TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5	[detail]	836218

Coexpressed
gene list

[Coexpressed gene list for CGA1]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

254016_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

254016_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

254016_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	828721
Refseq ID (protein)	NP_194345.1

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