functional annotation |
Function |
PLC-like phosphodiesterase family protein |
|
GO BP |
GO:0010442 [list] [network] guard cell morphogenesis
|
(2 genes)
|
IGI
|
|
GO:0052541 [list] [network] plant-type cell wall cellulose metabolic process
|
(13 genes)
|
IGI
|
|
GO:0006071 [list] [network] glycerol metabolic process
|
(24 genes)
|
IEA
|
|
GO:0010026 [list] [network] trichome differentiation
|
(83 genes)
|
IGI
|
|
GO:0048765 [list] [network] root hair cell differentiation
|
(109 genes)
|
IMP
|
|
GO:0010053 [list] [network] root epidermal cell differentiation
|
(127 genes)
|
IMP
|
|
GO:0009932 [list] [network] cell tip growth
|
(155 genes)
|
IMP
|
|
GO:0006629 [list] [network] lipid metabolic process
|
(947 genes)
|
IEA
|
|
|
GO CC |
GO:0046658 [list] [network] anchored component of plasma membrane
|
(154 genes)
|
IDA
|
|
GO:0031225 [list] [network] anchored component of membrane
|
(303 genes)
|
TAS
|
|
GO:0005829 [list] [network] cytosol
|
(3506 genes)
|
HDA
|
|
GO:0005886 [list] [network] plasma membrane
|
(3771 genes)
|
IDA
|
|
GO:0016021 [list] [network] integral component of membrane
|
(4803 genes)
|
IEA
|
|
|
GO MF |
GO:0008889 [list] [network] glycerophosphodiester phosphodiesterase activity
|
(12 genes)
|
IBA
|
|
GO:0016301 [list] [network] kinase activity
|
(1362 genes)
|
ISS
|
|
|
KEGG |
|
|
Protein |
NP_567755.1
|
BLAST |
NP_567755.1
|
Orthologous |
[Ortholog page]
SVL1 (ath)
SVL2 (ath)
SNC4 (ath)
LOC4329817 (osa)
LOC4336129 (osa)
LOC11436650 (mtr)
LOC100246982 (vvi)
LOC100382543 (zma)
LOC100383563 (zma)
LOC100792750 (gma)
LOC100811399 (gma)
LOC100814941 (gma)
LOC101262834 (sly)
LOC101263187 (sly)
LOC103627358 (zma)
LOC103831040 (bra)
LOC103833895 (bra)
LOC103844984 (bra)
LOC103852352 (bra)
LOC103852358 (bra)
LOC103856988 (bra)
LOC103861647 (bra)
LOC103861673 (bra)
LOC103866463 (bra)
|
Subcellular localization wolf |
chlo 6,
plas 1,
nucl 1,
vacu 1,
E.R. 1,
golg_plas 1,
E.R._vacu 1,
cysk_plas 1,
mito_plas 1,
cyto_plas 1
|
(predict for NP_567755.1)
|
|
Subcellular localization TargetP |
mito 5,
scret 4
|
(predict for NP_567755.1)
|
|
Gene coexpression |
Network*for coexpressed genes |
Genes directly connected with SHV3 on the network
coex z* |
Locus |
Function* |
Coexpression detail |
Entrez Gene ID* |
7.8 |
FER |
Malectin/receptor-like protein kinase family protein |
[detail] |
824318 |
7.8 |
LLG1 |
LORELEI-LIKE-GPI-ANCHORED PROTEIN 1 |
[detail] |
835716 |
7.2 |
THE1 |
protein kinase family protein |
[detail] |
835526 |
7.1 |
RALFL22 |
ralf-like 22 |
[detail] |
28718845 |
7.0 |
AT3G02880 |
Leucine-rich repeat protein kinase family protein |
[detail] |
821198 |
6.7 |
FUC95A |
1,2-alpha-L-fucosidase |
[detail] |
829575 |
6.3 |
CSLD2 |
cellulose-synthase like D2 |
[detail] |
831554 |
5.7 |
SLAH3 |
SLAC1 homologue 3 |
[detail] |
832468 |
|
Coexpressed gene list |
[Coexpressed gene list for SHV3]
|
Gene expression |
All samples |
[Expression pattern for all samples]
|
AtGenExpress* (Development) |
253925_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress* (Stress) |
253925_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress* (Hormone) |
253925_at
X axis is samples (xls file), and Y axis is log-expression.
|