[←][→] ath   At4g27050 Gene
functional annotation
Function   F-box/RNI-like superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0016567 [list] [network] protein ubiquitination  (434 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA ISM  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  IDA  
GO MF
KEGG
Protein NP_001031729.1  NP_001078451.1  NP_001328988.1  NP_194435.1  NP_974624.1 
BLAST NP_001031729.1  NP_001078451.1  NP_001328988.1  NP_194435.1  NP_974624.1 
Orthologous [Ortholog page] AT2G29910 (ath)  AT2G29930 (ath)  AT2G42720 (ath)  AT2G42730 (ath)  AT3G03040 (ath)  AT3G03030 (ath)  AT3G42770 (ath)  AT3G44060 (ath)  AT3G44080 (ath)  AT3G44090 (ath)  AT3G44180 (ath)  AT3G44810 (ath)  AT3G49150 (ath)  AT3G54160 (ath)  AT3G58820 (ath)  AT3G58860 (ath)  AT3G58880 (ath)  AT3G58890 (ath)  AT3G58900 (ath)  AT3G58920 (ath)  AT3G58930 (ath)  AT3G58940 (ath)  AT3G58950 (ath)  AT3G58960 (ath)  AT3G59000 (ath)  AT3G59160 (ath)  AT3G59170 (ath)  AT3G59180 (ath)  AT3G59190 (ath)  AT3G59200 (ath)  AT3G59210 (ath)  AT3G59230 (ath)  AT3G59240 (ath)  AT3G59250 (ath)  AT3G60040 (ath)  AT3G62430 (ath)  SAF1 (ath)  AT4G13960 (ath)  AT4G14096 (ath)  AT4G14103 (ath)  AT4G00320 (ath)  AT4G22280 (ath)  AT5G15620 (ath)  AT5G25860 (ath)  AT5G35995 (ath)  AT5G38386 (ath)  AT5G38390 (ath)  AT5G38396 (ath)  AT5G41630 (ath)  AT5G41830 (ath)  AT5G41840 (ath)  AT1G06630 (ath)  AT1G19070 (ath)  AT1G47915 (ath)  AT1G47920 (ath)  AT1G48390 (ath)  AT1G48400 (ath)  AT1G52650 (ath)  AT1G58310 (ath)  AT1G64540 (ath)  AT5G35926 (ath)  LOC11409284 (mtr)  LOC25481141 (mtr)  LOC25492325 (mtr)  LOC25492328 (mtr)  LOC25492331 (mtr)  AT5G38392 (ath)  LOC103830054 (bra)  LOC103830188 (bra)  LOC103830190 (bra)  LOC103830204 (bra)  LOC103830205 (bra)  LOC103830207 (bra)  LOC103830208 (bra)  LOC103833052 (bra)  LOC103833485 (bra)  LOC103841758 (bra)  LOC103841759 (bra)  LOC103841773 (bra)  LOC103841774 (bra)  LOC103841775 (bra)  LOC103842335 (bra)  LOC103842341 (bra)  LOC103842344 (bra)  LOC103842382 (bra)  LOC103843984 (bra)  LOC103845832 (bra)  LOC103853423 (bra)  LOC103855111 (bra)  LOC103857415 (bra)  LOC103858265 (bra)  LOC103858387 (bra)  LOC103860358 (bra)  LOC103860409 (bra)  LOC103862957 (bra)  LOC103864007 (bra)  LOC103864988 (bra)  LOC103865373 (bra)  LOC103866396 (bra)  LOC103868000 (bra)  LOC103870998 (bra)  LOC103872794 (bra)  LOC103872805 (bra)  LOC103874103 (bra)  LOC103874111 (bra)  LOC108869692 (bra)  LOC117125604 (bra)  LOC117125732 (bra)  LOC117125744 (bra)  LOC117127834 (bra)  LOC117127843 (bra)  LOC123145892 (tae)  LOC123163192 (tae)  LOC123170976 (tae)  LOC123172458 (tae) 
Subcellular
localization
wolf
cyto 6,  cyto_nucl 4,  nucl 1  (predict for NP_001031729.1)
cyto 6,  cyto_nucl 4,  nucl 1  (predict for NP_001078451.1)
cyto 6,  cyto_nucl 4,  nucl 1  (predict for NP_001328988.1)
cyto 6,  cyto_nucl 4,  nucl 1  (predict for NP_194435.1)
cyto 6,  cyto_nucl 4,  nucl 1  (predict for NP_974624.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001031729.1)
other 8  (predict for NP_001078451.1)
other 8  (predict for NP_001328988.1)
other 8  (predict for NP_194435.1)
other 8  (predict for NP_974624.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
Genes directly connected with AT4G27050 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.0 AT2G48100 Exonuclease family protein [detail] 819422
6.0 AT1G16650 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [detail] 838234
5.5 VPS22 EAP30/Vps36 family protein [detail] 828812
Coexpressed
gene list		 [Coexpressed gene list for AT4G27050]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
253945_at
253945_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
253945_at
253945_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
253945_at
253945_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 828813      
Refseq ID (protein) NP_001031729.1 
NP_001078451.1 
NP_001328988.1 
NP_194435.1 
NP_974624.1 


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