[][] ath   AT4G27050 Gene
functional annotation
Function   F-box/RNI-like superfamily protein
GO BP
GO:0016567 [list] [network] protein ubiquitination  (624 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
KEGG
Protein NP_001031729.1  NP_001078451.1  NP_001328988.1  NP_194435.1  NP_974624.1 
BLAST NP_001031729.1  NP_001078451.1  NP_001328988.1  NP_194435.1  NP_974624.1 
Orthologous [Ortholog page] AT2G29910 (ath)AT2G29930 (ath)AT2G42720 (ath)AT2G42730 (ath)AT3G03040 (ath)AT3G03030 (ath)AT3G42770 (ath)AT3G44060 (ath)AT3G44810 (ath)AT3G49150 (ath)AT3G54160 (ath)AT3G58820 (ath)AT3G58860 (ath)AT3G58880 (ath)AT3G58890 (ath)AT3G58900 (ath)AT3G58920 (ath)AT3G58930 (ath)AT3G58940 (ath)AT3G58950 (ath)AT3G58960 (ath)AT3G59000 (ath)AT3G59160 (ath)AT3G59170 (ath)AT3G59180 (ath)AT3G59190 (ath)AT3G59200 (ath)AT3G59210 (ath)AT3G59230 (ath)AT3G59240 (ath)AT3G59250 (ath)AT3G60040 (ath)AT3G62430 (ath)SAF1 (ath)AT4G13960 (ath)AT4G14096 (ath)AT4G14103 (ath)AT4G00320 (ath)AT4G22280 (ath)AT5G15620 (ath)AT5G25860 (ath)AT5G35995 (ath)AT5G38386 (ath)AT5G38390 (ath)AT5G38396 (ath)AT5G41630 (ath)AT5G41830 (ath)AT5G41840 (ath)AT1G06630 (ath)AT1G19070 (ath)AT1G47915 (ath)AT1G47920 (ath)AT1G48390 (ath)AT1G48400 (ath)AT1G52650 (ath)AT1G58310 (ath)AT1G64540 (ath)AT5G35926 (ath)LOC7485530 (ppo)LOC25485689 (mtr)AT5G38392 (ath)LOC102659597 (gma)LOC102665926 (gma)LOC103830054 (bra)LOC103830188 (bra)LOC103830189 (bra)LOC103830190 (bra)LOC103830204 (bra)LOC103830205 (bra)LOC103830207 (bra)LOC103830208 (bra)LOC103831400 (bra)LOC103833052 (bra)LOC103833485 (bra)LOC103841758 (bra)LOC103841759 (bra)LOC103841774 (bra)LOC103841775 (bra)LOC103841837 (bra)LOC103842339 (bra)LOC103842344 (bra)LOC103842382 (bra)LOC103843984 (bra)LOC103845832 (bra)LOC103855111 (bra)LOC103857415 (bra)LOC103858265 (bra)LOC103858387 (bra)LOC103860358 (bra)LOC103860409 (bra)LOC103862957 (bra)LOC103864007 (bra)LOC103864988 (bra)LOC103865373 (bra)LOC103866396 (bra)LOC103868000 (bra)LOC103870998 (bra)LOC103872794 (bra)LOC103872805 (bra)LOC103874103 (bra)LOC103874111 (bra)LOC104877721 (vvi)LOC104877735 (vvi)LOC108869692 (bra)
Subcellular
localization
wolf
cyto 6,  cyto_nucl 4,  nucl 1  (predict for NP_001031729.1)
cyto 6,  cyto_nucl 4,  nucl 1  (predict for NP_001078451.1)
cyto 6,  cyto_nucl 4,  nucl 1  (predict for NP_001328988.1)
cyto 6,  cyto_nucl 4,  nucl 1  (predict for NP_194435.1)
cyto 6,  cyto_nucl 4,  nucl 1  (predict for NP_974624.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001031729.1)
other 8  (predict for NP_001078451.1)
other 8  (predict for NP_001328988.1)
other 8  (predict for NP_194435.1)
other 8  (predict for NP_974624.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00400 Phenylalanine, tyrosine and tryptophan biosynthesis 6
ath01230 Biosynthesis of amino acids 6
ath00260 Glycine, serine and threonine metabolism 3
ath03013 RNA transport 2
Genes directly connected with AT4G27050 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
8.4 TSB2 tryptophan synthase beta-subunit 2 [detail] 828815
7.9 VPS22 EAP30/Vps36 family protein [detail] 828812
7.2 PDIL5-4 PDI-like 5-4 [detail] 828816
4.1 AT5G22730 F-box/RNI-like/FBD-like domains-containing protein [detail] 832336
3.6 DUF8 agenet domain protein (DOMAIN OF UNKNOWN FUNCTION 724 8) [detail] 832442
Coexpressed
gene list
[Coexpressed gene list for AT4G27050]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
253945_at
253945_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
253945_at
253945_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
253945_at
253945_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 828813    
Refseq ID (protein) NP_001031729.1 
NP_001078451.1 
NP_001328988.1 
NP_194435.1 
NP_974624.1 


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