ATTED-II : GeneID search result

[←][→] ath AT4G27240 Gene

functional annotation

Function

zinc finger (C2H2 type) family protein

GO BP

GO:0006355 [list] [network] regulation of transcription, DNA-templated

(1984 genes)

TAS

GO CC

GO:0005634 [list] [network] nucleus

(10793 genes)

ISM

GO MF

GO:0044212 [list] [network] transcription regulatory region DNA binding	(871 genes)	IPI
GO:0003700 [list] [network] DNA-binding transcription factor activity	(1599 genes)	ISS
GO:0003676 [list] [network] nucleic acid binding	(4187 genes)	IEA

KEGG

Protein

NP_001328336.1 NP_567769.1

BLAST

NP_001328336.1 NP_567769.1

Orthologous

[Ortholog page] AT5G54630 (ath) LOC4327046 (osa) LOC4341867 (osa) LOC7454399 (ppo) LOC11440887 (mtr) LOC100244205 (vvi) LOC100260605 (vvi) LOC100280447 (zma) LOC100285506 (zma) LOC100787790 (gma) LOC100800127 (gma) LOC100816798 (gma) LOC101261138 (sly) LOC101266475 (sly) LOC103628187 (zma) LOC103851949 (bra) LOC103866964 (bra)

Subcellular
localization
wolf

nucl 9	(predict for NP_001328336.1)
nucl 9, cyto 1	(predict for NP_567769.1)

Subcellular
localization
TargetP

other 7, chlo 4	(predict for NP_001328336.1)
other 7, chlo 4	(predict for NP_567769.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT4G27240 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
4.3	HCF243	Serine/Threonine-kinase pakA-like protein	[detail]	820740
4.2	BRG2	zinc ion binding protein	[detail]	844252
4.1	AT5G41920	GRAS family transcription factor	[detail]	834197
3.9	AT5G59000	RING/FYVE/PHD zinc finger superfamily protein	[detail]	836017

Coexpressed
gene list

[Coexpressed gene list for AT4G27240]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

253916_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

253916_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

253916_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	828832
Refseq ID (protein)	NP_001328336.1
Refseq ID (protein)	NP_567769.1

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