[←][→] ath   AT4G27280 Gene
functional annotation
Function   Calcium-binding EF-hand family protein  
GO BP
GO:0080167 [list] [network] response to karrikin  (128 genes)  IEP  
GO:0071456 [list] [network] cellular response to hypoxia  (238 genes)  HEP  
GO:0009733 [list] [network] response to auxin  (407 genes)  IDA  
GO CC
GO:0005886 [list] [network] plasma membrane  (3771 genes)  ISM  
GO MF
GO:0005509 [list] [network] calcium ion binding  (242 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_194458.1 
BLAST NP_194458.1 
Orthologous [Ortholog page] PBP1 (ath)  LOC4327059 (osa)  LOC4341871 (osa)  LOC7454390 (ppo)  LOC7479105 (ppo)  LOC7497001 (ppo)  LOC7497418 (ppo)  LOC11408436 (mtr)  LOC11411428 (mtr)  LOC11411899 (mtr)  LOC11416496 (mtr)  LOC11418847 (mtr)  LOC25483437 (mtr)  LOC25502645 (mtr)  LOC100249342 (vvi)  LOC100252031 (vvi)  LOC100260800 (vvi)  LOC100264287 (vvi)  LOC100265313 (vvi)  LOC100266004 (vvi)  LOC100267424 (vvi)  LOC100282390 (zma)  LOC100285110 (zma)  LOC100306210 (gma)  LOC100306396 (gma)  LOC100500465 (gma)  LOC100527035 (gma)  LOC100527206 (gma)  LOC100775872 (gma)  LOC100776185 (gma)  LOC100794479 (gma)  LOC100795879 (gma)  LOC100799975 (gma)  LOC100808976 (gma)  LOC100818434 (gma)  LOC101245019 (sly)  LOC101248520 (sly)  LOC101251823 (sly)  LOC101265256 (sly)  LOC101265802 (sly)  LOC101266533 (sly)  LOC103641962 (zma)  LOC103844903 (bra)  LOC103851959 (bra)  LOC103866992 (bra) 
Subcellular
localization
wolf
nucl 4,  mito 4,  chlo 1,  plas 1,  extr 1  (predict for NP_194458.1)
Subcellular
localization
TargetP
chlo 4,  mito 3,  other 3  (predict for NP_194458.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT4G27280 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
15.2 PBP1 pinoid-binding protein 1 [detail] 835537
14.4 CAF1a Polynucleotidyl transferase, ribonuclease H-like superfamily protein [detail] 823551
14.4 ERF104 ethylene response factor 104 [detail] 836281
13.1 MYB77 myb domain protein 77 [detail] 824168
13.0 AT3G50800 hypothetical protein [detail] 824244
12.8 AT1G07135 glycine-rich protein [detail] 837224
10.6 AT1G35210 hypothetical protein [detail] 840410
10.5 BAP1 BON association protein 1 [detail] 825291
10.3 AT1G32920 hypothetical protein [detail] 28717292
8.3 AT3G25600 Calcium-binding EF-hand family protein [detail] 822147
8.2 AT1G72240 hypothetical protein [detail] 843556
7.8 AT1G72940 Toll-Interleukin-Resistance (TIR) domain-containing protein [detail] 843625
7.3 AT2G41640 Glycosyltransferase family 61 protein [detail] 818762
7.0 HSFB2A heat shock transcription factor B2A [detail] 836322
6.7 AT3G29000 Calcium-binding EF-hand family protein [detail] 822540
4.1 AT1G22470 hypothetical protein [detail] 838853
Coexpressed
gene list		 [Coexpressed gene list for AT4G27280]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
253915_at
253915_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
253915_at
253915_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
253915_at
253915_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 828836      
Refseq ID (protein) NP_194458.1 


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