[][] ath   AT4G27860 Gene
functional annotation
Function   vacuolar iron transporter (VIT) family protein
GO BP
GO:0006880 [list] [network] intracellular sequestering of iron ion  (14 genes)  IBA  
GO:0030026 [list] [network] cellular manganese ion homeostasis  (21 genes)  IBA  
GO CC
GO:0010168 [list] [network] ER body  (12 genes)  IBA IDA  
GO:0005789 [list] [network] endoplasmic reticulum membrane  (466 genes)  IEA  
GO:0005783 [list] [network] endoplasmic reticulum  (877 genes)  IBA IDA  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0005384 [list] [network] manganese ion transmembrane transporter activity  (25 genes)  IBA IGI  
GO:0005381 [list] [network] iron ion transmembrane transporter activity  (27 genes)  IBA IGI  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001190855.1  NP_001329316.1  NP_001329317.1  NP_567788.1 
BLAST NP_001190855.1  NP_001329316.1  NP_001329317.1  NP_567788.1 
Orthologous [Ortholog page] AT4G27870 (ath)MEB2 (ath)LOC4339849 (osa)LOC11407311 (mtr)LOC25500320 (mtr)LOC100788580 (gma)LOC100789148 (gma)LOC100800852 (gma)LOC100852895 (vvi)LOC100852932 (vvi)LOC101245142 (sly)LOC101249574 (sly)LOC102659580 (gma)LOC103629364 (zma)LOC103861794 (bra)LOC103867660 (bra)LOC103868731 (bra)LOC103874296 (bra)LOC104878234 (vvi)LOC104878408 (vvi)LOC108871330 (bra)
Subcellular
localization
wolf
nucl 6,  cyto_nucl 4,  vacu 1,  chlo 1,  plas 1,  cysk 1,  E.R._vacu 1,  cysk_plas 1  (predict for NP_001190855.1)
nucl 5,  cyto_nucl 4,  vacu 1,  cyto 1,  chlo 1,  plas 1,  cysk 1,  E.R._vacu 1,  cysk_plas 1  (predict for NP_001329316.1)
nucl 5,  cyto_nucl 4,  vacu 1,  cyto 1,  chlo 1,  plas 1,  cysk 1,  E.R._vacu 1,  cysk_plas 1  (predict for NP_001329317.1)
nucl 6,  cyto_nucl 4,  vacu 1,  chlo 1,  plas 1,  cysk 1,  E.R._vacu 1,  cysk_plas 1  (predict for NP_567788.1)
Subcellular
localization
TargetP
other 7,  chlo 6  (predict for NP_001190855.1)
other 7,  chlo 6  (predict for NP_001329316.1)
other 7,  chlo 6  (predict for NP_001329317.1)
other 7,  chlo 6  (predict for NP_567788.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with MEB1 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
14.0 MEB2 Vacuolar iron transporter (VIT) family protein [detail] 832496
12.2 JAL34 Mannose-binding lectin superfamily protein [detail] 820894
11.0 NAI2 DNA topoisomerase-like protein [detail] 820839
9.9 MVP1 GDSL-like Lipase/Acylhydrolase superfamily protein [detail] 841841
9.9 NAI1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein [detail] 816807
9.3 AT1G06620 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [detail] 837171
8.8 AT5G23820 MD-2-related lipid recognition domain-containing protein [detail] 832447
6.8 IGMT5 O-methyltransferase family protein [detail] 844013
6.6 AT1G77420 alpha/beta-Hydrolases superfamily protein [detail] 844079
6.0 GGH1 gamma-glutamyl hydrolase 1 [detail] 844202
4.7 LOX6 PLAT/LH2 domain-containing lipoxygenase family protein [detail] 843077
4.3 AT4G27870 Vacuolar iron transporter (VIT) family protein [detail] 828900
3.6 AT2G04100 MATE efflux family protein [detail] 814946
Coexpressed
gene list
[Coexpressed gene list for MEB1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
253842_at
253842_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
253842_at
253842_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
253842_at
253842_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 828899    
Refseq ID (protein) NP_001190855.1 
NP_001329316.1 
NP_001329317.1 
NP_567788.1 


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