[←][→] ath   AT4G27880 Gene
functional annotation
Function   Protein with RING/U-box and TRAF-like domain  
GO BP
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (436 genes)  IEA  
GO:0016567 [list] [network] protein ubiquitination  (624 genes)  IEA  
GO:0007275 [list] [network] multicellular organism development  (2714 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (4405 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IEA ISM  
GO MF
GO:0008270 [list] [network] zinc ion binding  (554 genes)  IEA  
GO:0016740 [list] [network] transferase activity  (3833 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath04120 [list] [network] Ubiquitin mediated proteolysis (143 genes)
Protein NP_194517.1 
BLAST NP_194517.1 
Orthologous [Ortholog page] AT3G61790 (ath)  LOC4327774 (osa)  LOC4329066 (osa)  LOC4338181 (osa)  LOC7457400 (ppo)  LOC7475187 (ppo)  LOC7486772 (ppo)  LOC7496400 (ppo)  LOC11423170 (mtr)  LOC11446457 (mtr)  LOC25499735 (mtr)  LOC25500674 (mtr)  LOC100170241 (zma)  LOC100170242 (zma)  LOC100192741 (zma)  LOC100233084 (vvi)  LOC100252009 (vvi)  LOC100279741 (zma)  LOC100779238 (gma)  LOC100792687 (gma)  LOC100810573 (gma)  LOC101246723 (sly)  LOC101253831 (sly)  LOC101257844 (sly)  SINA4 (sly)  LOC101264159 (sly)  LOC103626898 (zma)  LOC103830327 (bra)  LOC103834788 (bra)  LOC103862812 (bra)  LOC103867677 (bra) 
Subcellular
localization
wolf
nucl 6,  chlo 1,  cyto 1  (predict for NP_194517.1)
Subcellular
localization
TargetP
other 9  (predict for NP_194517.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04130 SNARE interactions in vesicular transport 2
ath04144 Endocytosis 2
ath04141 Protein processing in endoplasmic reticulum 2
Genes directly connected with AT4G27880 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.9 AT3G57340 DnaJ heat shock amino-terminal domain protein (DUF1977) [detail] 824901
6.7 AT3G06270 Protein phosphatase 2C family protein [detail] 819801
6.4 GOS11 golgi snare 11 [detail] 838158
6.3 BPC1 basic pentacysteine1 [detail] 814724
6.1 NDL1 N-MYC downregulated-like 1 [detail] 835777
5.5 AT3G09760 RING/U-box superfamily protein [detail] 820134
Coexpressed
gene list		 [Coexpressed gene list for AT4G27880]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
253838_at
253838_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
253838_at
253838_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
253838_at
253838_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 828901      
Refseq ID (protein) NP_194517.1 


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