ATTED-II : GeneID search result

[←][→] ath At4g28080 Gene

functional annotation

Function

Tetratricopeptide repeat (TPR)-like superfamily protein

GO BP

GO:0019750 [list] [network] chloroplast localization	(22 genes)	IMP
GO:0006996 [list] [network] organelle organization	(1102 genes)	IEA

GO CC

GO:0005886 [list] [network] plasma membrane	(2529 genes)	HDA
GO:0005829 [list] [network] cytosol	(2559 genes)	ISS
GO:0005634 [list] [network] nucleus	(10305 genes)	ISM ISS

GO MF

GO:0003729 [list] [network] mRNA binding

(1535 genes)

IDA

KEGG

Protein

NP_194537.7

BLAST

NP_194537.7

Orthologous

[Ortholog page] LOC4328917 (osa) LOC7465978 (ppo) LOC7489422 (ppo) LOC100792534 (gma) LOC100806823 (gma) LOC101252601 (sly) LOC103834776 (bra) LOC103861804 (bra) LOC112418287 (mtr) LOC123128742 (tae) LOC123139054 (tae) LOC123145880 (tae) LOC123401197 (hvu)

Subcellular
localization
wolf

nucl 6, cyto 2, vacu 1, cysk 1

(predict for NP_194537.7)

Subcellular
localization
TargetP

other 8, chlo 3

(predict for NP_194537.7)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT4G28080 on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
10.4	AT1G01320	Tetratricopeptide repeat (TPR)-like superfamily protein	[detail]	839293
8.0	AT3G48200	uncharacterized protein	[detail]	823977
7.9	AT1G15290	Tetratricopeptide repeat (TPR)-like superfamily protein	[detail]	838097
5.7	PHOT2	phototropin 2	[detail]	835926
5.0	AT5G67385	Phototropic-responsive NPH3 family protein	[detail]	836874

Coexpressed
gene list

[Coexpressed gene list for AT4G28080]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

253849_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

253849_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

253849_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	828923
Refseq ID (protein)	NP_194537.7

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