[←][→] ath   AT4G28140 Gene
functional annotation
Function   Integrase-type DNA-binding superfamily protein  
GO BP
GO:0010200 [list] [network] response to chitin  (142 genes)  IEP  
GO:0009873 [list] [network] ethylene-activated signaling pathway  (191 genes)  IEA  
GO:0006355 [list] [network] regulation of transcription, DNA-templated  (1984 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IEA ISM  
GO MF
GO:0044212 [list] [network] transcription regulatory region DNA binding  (871 genes)  IPI  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1599 genes)  ISS  
GO:0003677 [list] [network] DNA binding  (2280 genes)  IEA  
KEGG
Protein NP_194543.1 
BLAST NP_194543.1 
Orthologous [Ortholog page] ERF53 (ath)  LOC4336472 (osa)  LOC7494418 (ppo)  LOC9268771 (osa)  LOC25487633 (mtr)  DREB5 (gma)  LOC100246593 (vvi)  LOC100799750 (gma)  LOC100809887 (gma)  LOC100811328 (gma)  LOC101264838 (sly)  LOC103627463 (zma)  LOC103641866 (zma)  LOC103646159 (zma)  LOC103834775 (bra)  LOC103842576 (bra)  LOC103861811 (bra)  LOC103867861 (bra)  LOC104877562 (vvi)  LOC109939235 (zma) 
Subcellular
localization
wolf
nucl 10  (predict for NP_194543.1)
Subcellular
localization
TargetP
other 8,  chlo 3  (predict for NP_194543.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT4G28140 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
20.5 ERF53 Integrase-type DNA-binding superfamily protein [detail] 816622
6.2 AT1G77680 Ribonuclease II/R family protein [detail] 844104
6.0 AT3G05640 Protein phosphatase 2C family protein [detail] 819731
5.3 AT5G24080 Protein kinase superfamily protein [detail] 832473
5.2 AT4G28150 hypothetical protein (DUF789) [detail] 828930
Coexpressed
gene list		 [Coexpressed gene list for AT4G28140]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
253799_at
253799_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
253799_at
253799_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
253799_at
253799_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 828929      
Refseq ID (protein) NP_194543.1 


The preparation time of this page was 0.1 [sec].