[←][→] ath   AT4G28200 Gene
functional annotation
Function   U3 small nucleolar RNA-associated-like protein  
GO BP
GO:0000462 [list] [network] maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)  (27 genes)  IBA  
GO CC
GO:0034388 [list] [network] Pwp2p-containing subcomplex of 90S preribosome  (5 genes)  IBA  
GO:0032040 [list] [network] small-subunit processome  (41 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0030515 [list] [network] snoRNA binding  (19 genes)  IEA  
KEGG ath03008 [list] [network] Ribosome biogenesis in eukaryotes (98 genes)
Protein NP_194549.1 
BLAST NP_194549.1 
Orthologous [Ortholog page] LOC4328001 (osa)  LOC7477962 (ppo)  LOC11435791 (mtr)  LOC100267580 (vvi)  LOC100817094 (gma)  LOC100820428 (gma)  LOC101257911 (sly)  LOC103648282 (zma)  LOC103834774 (bra) 
Subcellular
localization
wolf
cyto 6,  nucl 3,  cyto_pero 3,  cyto_E.R. 3,  cyto_plas 3  (predict for NP_194549.1)
Subcellular
localization
TargetP
other 9  (predict for NP_194549.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 6
Genes directly connected with AT4G28200 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
11.3 AT2G28600 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 817408
10.5 AT1G50920 Nucleolar GTP-binding protein [detail] 841514
10.1 AT3G01160 pre-rRNA-processing ESF1-like protein [detail] 820504
8.3 PUM23 pumilio 23 [detail] 843564
8.0 AT1G20370 Pseudouridine synthase family protein [detail] 838625
7.7 CER7 3'-5'-exoribonuclease family protein [detail] 825221
6.9 UBA 2 ubiquitin activating enzyme 2 [detail] 830534
Coexpressed
gene list		 [Coexpressed gene list for AT4G28200]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
253803_at
253803_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
253803_at
253803_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
253803_at
253803_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 828935      
Refseq ID (protein) NP_194549.1 


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