[←][→] ath   At4g28450 Gene
functional annotation
Function   WD repeat and SOF domain-containing protein 1    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0016567 [list] [network] protein ubiquitination  (434 genes)  IEA  
GO CC
GO:0080008 [list] [network] Cul4-RING E3 ubiquitin ligase complex  (121 genes)  IPI  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_567810.5 
BLAST NP_567810.5 
Orthologous [Ortholog page] LOC4326362 (osa)  LOC7459966 (ppo)  LOC11414546 (mtr)  LOC18106796 (ppo)  LOC100812671 (gma)  LOC101251902 (sly)  LOC103861832 (bra)  LOC123060847 (tae)  LOC123069430 (tae)  LOC123077935 (tae)  LOC123443297 (hvu) 
Subcellular
localization
wolf
nucl 6,  chlo 2,  cyto 1,  mito 1,  cysk 1  (predict for NP_567810.5)
Subcellular
localization
TargetP
other 6,  mito 4  (predict for NP_567810.5)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 6
ath03020 RNA polymerase 2
Genes directly connected with AT4G28450 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
13.0 AT5G15550 Transducin/WD40 repeat-like superfamily protein [detail] 831408
12.9 AT5G11240 transducin family protein / WD-40 repeat family protein [detail] 830994
12.3 AT2G18900 Transducin/WD40 repeat-like superfamily protein [detail] 816406
11.9 WDR55 transducin family protein / WD-40 repeat family protein [detail] 817987
11.5 AT3G09720 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 820129
9.4 AT4G31790 Tetrapyrrole (Corrin/Porphyrin) Methylase [detail] 829307
7.4 AT5G67630 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 836899
5.9 AT2G23890 HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase [detail] 816921
Coexpressed
gene list		 [Coexpressed gene list for AT4G28450]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
253777_at
253777_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
253777_at
253777_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
253777_at
253777_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 828962      
Refseq ID (protein) NP_567810.5 


The preparation time of this page was 1.2 [sec].