[←][→] ath   At4g28990 Gene
functional annotation
Function   RNA-binding protein-like protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0009793 [list] [network] embryo development ending in seed dormancy  (697 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1656 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
KEGG
Protein NP_001154272.1  NP_194628.1 
BLAST NP_001154272.1  NP_194628.1 
Orthologous [Ortholog page] LOC4328998 (osa)  LOC4340930 (osa)  LOC7476292 (ppo)  LOC11438547 (mtr)  LOC18100420 (ppo)  LOC100799651 (gma)  LOC100817587 (gma)  LOC101267115 (sly)  LOC103853943 (bra)  LOC103862141 (bra)  LOC123147845 (tae)  LOC123160704 (tae)  LOC123166618 (tae)  LOC123413391 (hvu) 
Subcellular
localization
wolf
nucl 6,  E.R. 2,  plas 1,  golg 1,  golg_plas 1  (predict for NP_001154272.1)
nucl 9,  chlo 1,  plas 1  (predict for NP_194628.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001154272.1)
other 7  (predict for NP_194628.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
ath03013 Nucleocytoplasmic transport 2
Genes directly connected with AT4G28990 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.0 AT5G01160 RING/U-box superfamily protein [detail] 831742
7.6 SR45 arginine/serine-rich 45 [detail] 838230
7.4 AT4G31200 SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein [detail] 829247
7.2 AT5G57370 U4/U6.U5 small nuclear ribonucleoprotein [detail] 835843
6.4 AT4G03120 C2H2 and C2HC zinc fingers superfamily protein [detail] 828071
Coexpressed
gene list		 [Coexpressed gene list for AT4G28990]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
253748_at
253748_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
253748_at
253748_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
253748_at
253748_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 829020      
Refseq ID (protein) NP_001154272.1 
NP_194628.1 


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