[←][→] ath   AT4G29170 Gene
functional annotation
Function   Mnd1 family protein  
GO BP
GO:0010212 [list] [network] response to ionizing radiation  (26 genes)  IMP  
GO:0007131 [list] [network] reciprocal meiotic recombination  (49 genes)  IBA  
GO:0006302 [list] [network] double-strand break repair  (108 genes)  IMP  
GO:0009553 [list] [network] embryo sac development  (146 genes)  IMP  
GO:0009555 [list] [network] pollen development  (337 genes)  IMP  
GO CC
GO:0005730 [list] [network] nucleolus  (477 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0003690 [list] [network] double-stranded DNA binding  (343 genes)  IBA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001078469.1  NP_001329788.1  NP_194646.2 
BLAST NP_001078469.1  NP_001329788.1  NP_194646.2 
Orthologous [Ortholog page] LOC4346611 (osa)  LOC25497006 (mtr)  LOC100264497 (vvi)  LOC100778781 (gma)  LOC101264096 (sly)  LOC103647183 (zma)  LOC103861875 (bra) 
Subcellular
localization
wolf
nucl 4,  cyto_nucl 4,  cyto 3,  cysk 1  (predict for NP_001078469.1)
nucl 9  (predict for NP_001329788.1)
nucl 10  (predict for NP_194646.2)
Subcellular
localization
TargetP
other 7  (predict for NP_001078469.1)
other 8  (predict for NP_001329788.1)
other 8  (predict for NP_194646.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with ATMND1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.4 AT3G15140 Polynucleotidyl transferase, ribonuclease H-like superfamily protein [detail] 820745
7.7 AHP2 Tat-binding protein 1(Tbp-1)-interacting protein (TBPIP) [detail] 837893
7.2 AT1G69210 Uncharacterized protein family UPF0090 [detail] 843252
Coexpressed
gene list		 [Coexpressed gene list for ATMND1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
253733_at
253733_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
253733_at
253733_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
253733_at
253733_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 829038      
Refseq ID (protein) NP_001078469.1 
NP_001329788.1 
NP_194646.2 


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