[][] ath   AT4G29330 Gene
functional annotation
Function   DERLIN-1
GO BP
GO:0030968 [list] [network] endoplasmic reticulum unfolded protein response  (29 genes)  IBA  
GO:0030433 [list] [network] ubiquitin-dependent ERAD pathway  (36 genes)  IBA  
GO CC
GO:0000839 [list] [network] Hrd1p ubiquitin ligase ERAD-L complex  (1 genes)  IBA  
GO:0030176 [list] [network] integral component of endoplasmic reticulum membrane  (67 genes)  IBA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO MF
GO:1990381 [list] [network] ubiquitin-specific protease binding  (9 genes)  IBA  
GO:0051787 [list] [network] misfolded protein binding  (16 genes)  IBA  
KEGG ath04141 [list] [network] Protein processing in endoplasmic reticulum (211 genes)
Protein NP_001328427.1  NP_194662.2 
BLAST NP_001328427.1  NP_194662.2 
Orthologous [Ortholog page] LOC606470 (zma)LOC4338013 (osa)LOC7484679 (ppo)LOC11412878 (mtr)LOC100037763 (zma)LOC100250894 (vvi)LOC100783754 (gma)LOC100785303 (gma)LOC101266220 (sly)LOC103853697 (bra)
Subcellular
localization
wolf
cyto 3,  cyto_E.R. 2,  chlo 2,  vacu 1,  E.R. 1,  chlo_mito 1  (predict for NP_001328427.1)
chlo 6,  cyto 1,  vacu 1,  plas 1,  E.R. 1,  cyto_nucl 1,  cyto_pero 1,  E.R._plas 1  (predict for NP_194662.2)
Subcellular
localization
TargetP
other 8  (predict for NP_001328427.1)
other 8  (predict for NP_194662.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 3
Genes directly connected with DER1 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
9.3 ATERDJ3A DNAJ heat shock N-terminal domain-containing protein [detail] 820049
8.5 AT2G41160 Ubiquitin-associated (UBA) protein [detail] 818715
8.3 TIN1 tunicamycin induced protein [detail] 836572
7.2 BI1 BAX inhibitor 1 [detail] 834758
6.9 DER2.1 DERLIN-2.1 [detail] 828269
5.9 AT3G56740 Ubiquitin-associated (UBA) protein [detail] 824841
5.3 AT1G16040 phosphatidylinositol-glycan biosynthesis class F-like protein [detail] 838175
Coexpressed
gene list
[Coexpressed gene list for DER1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
253712_at
253712_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
253712_at
253712_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
253712_at
253712_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 829054    
Refseq ID (protein) NP_001328427.1 
NP_194662.2 


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