| functional annotation |
| Function |
nuclease |
Plant GARDEN Plant GARDEN JBrowse
|
| GO BP |
|
GO:0009873 [list] [network] ethylene-activated signaling pathway
|
(80 genes)
|
IEA
|
 |
|
GO:0071446 [list] [network] cellular response to salicylic acid stimulus
|
(110 genes)
|
IEA
|
|
|
GO:0071456 [list] [network] cellular response to hypoxia
|
(241 genes)
|
HEP
|
|
|
GO:0010200 [list] [network] response to chitin
|
(304 genes)
|
IEA
|
|
|
GO:0002376 [list] [network] immune system process
|
(453 genes)
|
IEA
|
|
|
GO:0009409 [list] [network] response to cold
|
(472 genes)
|
IEA
|
|
|
GO:0009651 [list] [network] response to salt stress
|
(607 genes)
|
IEA
|
|
|
GO:0009753 [list] [network] response to jasmonic acid
|
(611 genes)
|
IEA
|
|
|
GO:0050832 [list] [network] defense response to fungus
|
(705 genes)
|
IEA
|
|
|
GO:0031347 [list] [network] regulation of defense response
|
(749 genes)
|
IEA
|
|
|
GO:0009611 [list] [network] response to wounding
|
(816 genes)
|
IEA
|
|
|
GO:0042742 [list] [network] defense response to bacterium
|
(980 genes)
|
IEA
|
|
|
GO:0009414 [list] [network] response to water deprivation
|
(1006 genes)
|
IEA
|
|
|
GO:0009737 [list] [network] response to abscisic acid
|
(1086 genes)
|
IEA
|
|
|
GO:1901701 [list] [network] cellular response to oxygen-containing compound
|
(1115 genes)
|
IEA
|
|
|
GO:0032870 [list] [network] cellular response to hormone stimulus
|
(1136 genes)
|
IEA
|
|
|
GO:0007165 [list] [network] signal transduction
|
(2054 genes)
|
IEA
|
|
|
| GO CC |
|
| GO MF |
|
| KEGG |
|
|
| Protein |
NP_567834.2
|
| BLAST |
NP_567834.2
|
| Orthologous |
[Ortholog page]
LOC103853317 (bra)
LOC103861909 (bra)
|
Subcellular
localization
wolf |
|
nucl 6,
cyto 2,
chlo 1,
cysk 1
|
(predict for NP_567834.2)
|
|
Subcellular
localization
TargetP |
|
other 7
|
(predict for NP_567834.2)
|
|
| Gene coexpression |
Network*for
coexpressed
genes |
Genes directly connected with AT4G29780 on the network
| coex z* |
Locus |
Function* |
CoexViewer |
Entrez Gene ID* |
| 18.1 |
DIC2 |
dicarboxylate carrier 2 |
[detail] |
828559 |
| 16.1 |
SZF1 |
salt-inducible zinc finger 1 |
[detail] |
824764 |
| 13.7 |
STZ |
salt tolerance zinc finger |
[detail] |
839666 |
| 12.3 |
ACS6 |
1-aminocyclopropane-1-carboxylic acid (acc) synthase 6 |
[detail] |
826730 |
| 11.6 |
AT2G30020 |
Protein phosphatase 2C family protein |
[detail] |
817553 |
| 11.2 |
AT3G04640 |
glycine-rich protein |
[detail] |
819622 |
| 10.8 |
RDUF2 |
zinc finger (C3HC4-type RING finger) family protein |
[detail] |
836074 |
| 10.7 |
AT5G17350 |
uncharacterized protein |
[detail] |
831601 |
| 10.5 |
NUDT4 |
nudix hydrolase homolog 4 |
[detail] |
838410 |
| 10.4 |
ERF13 |
ethylene-responsive element binding factor 13 |
[detail] |
819093 |
| 10.1 |
AT2G39650 |
cruciferin (DUF506) |
[detail] |
818548 |
| 10.0 |
AT3G56880 |
VQ motif-containing protein |
[detail] |
824855 |
| 9.6 |
AT3G02840 |
ARM repeat superfamily protein |
[detail] |
821225 |
| 9.6 |
AT1G32920 |
uncharacterized protein |
[detail] |
28717292 |
| 9.6 |
AT1G23710 |
hypothetical protein (DUF1645) |
[detail] |
838981 |
| 9.5 |
CYP707A3 |
cytochrome P450, family 707, subfamily A, polypeptide 3 |
[detail] |
834570 |
| 9.3 |
AT1G18740 |
ROH1, putative (DUF793) |
[detail] |
838456 |
| 8.7 |
AT2G27080 |
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family |
[detail] |
817250 |
| 8.4 |
SRC2 |
soybean gene regulated by cold-2 |
[detail] |
837428 |
| 8.3 |
CAMBP25 |
calmodulin (CAM)-binding protein of 25 kDa |
[detail] |
818701 |
| 8.0 |
AT2G41640 |
Glycosyltransferase family 61 protein |
[detail] |
818762 |
| 8.0 |
FBS1 |
F-box family protein |
[detail] |
842428 |
| 7.9 |
LYK5 |
Protein kinase superfamily protein |
[detail] |
817923 |
| 7.4 |
AT4G24380 |
dihydrofolate reductase |
[detail] |
828540 |
| 7.1 |
AT1G50745 |
plant mobile domain protein |
[detail] |
28717343 |
| 7.0 |
AT3G16510 |
Calcium-dependent lipid-binding (CaLB domain) family protein |
[detail] |
820899 |
|
Coexpressed
gene list |
[Coexpressed gene list for AT4G29780]
|
| Gene expression |
| All samples |
[Expression pattern for all samples]
|
AtGenExpress*
(Development) |
253643_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress*
(Stress) |
253643_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress*
(Hormone) |
253643_at
X axis is samples (xls file), and Y axis is log-expression.
|
At4g29780 Gene
