[←][→] ath   AT4G30400 Gene
functional annotation
Function   RING/U-box superfamily protein  
GO BP
GO:0080167 [list] [network] response to karrikin  (128 genes)  IEP  
GO:0016567 [list] [network] protein ubiquitination  (624 genes)  IBA IEA  
GO CC
GO:0005886 [list] [network] plasma membrane  (3771 genes)  HDA  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0031625 [list] [network] ubiquitin protein ligase binding  (54 genes)  IBA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
GO:0016740 [list] [network] transferase activity  (3833 genes)  IEA  
KEGG
Protein NP_567846.1 
BLAST NP_567846.1 
Orthologous [Ortholog page] MEE16 (ath)  LOC4345705 (osa)  LOC7465990 (ppo)  LOC7493353 (ppo)  LOC11445836 (mtr)  LOC25495312 (mtr)  LOC100250113 (vvi)  LOC100273075 (zma)  LOC100797283 (gma)  LOC100812651 (gma)  LOC101260833 (sly)  LOC103837915 (bra)  LOC103839976 (bra)  LOC103852700 (bra)  LOC103861957 (bra) 
Subcellular
localization
wolf
chlo 3,  E.R. 3,  nucl 1,  cysk_nucl 1,  cyto 1,  mito 1,  extr 1,  vacu 1  (predict for NP_567846.1)
Subcellular
localization
TargetP
chlo 3  (predict for NP_567846.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00062 Fatty acid elongation 2
ath04626 Plant-pathogen interaction 2
Genes directly connected with AT4G30400 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.9 ASG8 hypothetical protein [detail] 818642
6.5 KCS10 3-ketoacyl-CoA synthase 10 [detail] 817165
5.9 ABCG12 ABC-2 type transporter family protein [detail] 841575
5.7 ATL4 TOXICOS EN LEVADURA 4 [detail] 825192
5.6 AOP1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [detail] 828100
5.5 AT4G22730 Leucine-rich repeat protein kinase family protein [detail] 828369
5.5 AT2G02780 Leucine-rich repeat protein kinase family protein [detail] 814807
5.1 WAVH2 Zinc finger (C3HC4-type RING finger) family protein [detail] 836695
5.1 RLK receptor-like kinase [detail] 836863
4.6 AT3G57070 Glutaredoxin family protein [detail] 824874
4.4 RGL2 RGA-like 2 [detail] 821251
4.0 MEE16 RING/U-box superfamily protein [detail] 816380
Coexpressed
gene list		 [Coexpressed gene list for AT4G30400]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
253580_at
253580_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
253580_at
253580_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
253580_at
253580_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 829163      
Refseq ID (protein) NP_567846.1 


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