| functional annotation |
| Function |
fatty acid desaturase 6 |
Plant GARDEN Plant GARDEN JBrowse
|
| GO BP |
|
GO:0010205 [list] [network] photoinhibition
|
(11 genes)
|
IMP
|
 |
|
GO:0006636 [list] [network] unsaturated fatty acid biosynthetic process
|
(24 genes)
|
IEA
|
|
|
GO:0006633 [list] [network] fatty acid biosynthetic process
|
(120 genes)
|
TAS
|
|
|
| GO CC |
|
| GO MF |
|
GO:0102655 [list] [network] 1-18:1-2-trans-16:1-phosphatidylglycerol desaturase activity
|
(1 genes)
|
IEA
|
|
|
GO:0102834 [list] [network] 1-18:1-2-16:0-monogalactosyldiacylglycerol acyl-lipid omega-6 desaturase activity
|
(1 genes)
|
IEA
|
|
|
GO:0102836 [list] [network] 1-18:1-2-16:1-monogalactosyldiacylglyceroldesaturase activity
|
(1 genes)
|
IEA
|
|
|
GO:0102838 [list] [network] 1-18:1-2-16:2-monogalactosyldiacylglycerol desaturase activity
|
(1 genes)
|
IEA
|
|
|
GO:0102841 [list] [network] 1-18:1-2-16:2-monogalactosyldiacylglycerol synthase activity
|
(1 genes)
|
IEA
|
|
|
GO:0102844 [list] [network] 1-18:2-2-16:1-monogalactosyldiacylglycerol desaturase activity (SN2-16:2 forming)
|
(1 genes)
|
IEA
|
|
|
GO:0102850 [list] [network] 1-18:1-2-16:0-phosphatidylglycerol omega-6 desaturase activity
|
(1 genes)
|
IEA
|
|
|
GO:0102873 [list] [network] 1-18:1-2-16:0-digalactosyldiacylglycerol desaturase activity
|
(1 genes)
|
IEA
|
|
|
GO:0045485 [list] [network] omega-6 fatty acid desaturase activity
|
(2 genes)
|
IGI
|
|
|
| KEGG |
|
|
| Protein |
NP_194824.1
|
| BLAST |
NP_194824.1
|
| Orthologous |
[Ortholog page]
FAD6.1 (gma)
LOC4345686 (osa)
LOC7485241 (ppo)
LOC11441075 (mtr)
LOC18107791 (ppo)
LOC25488375 (mtr)
LOC100125744 (tae)
LOC101265653 (sly)
LOC103834644 (bra)
LOC103852217 (bra)
LOC123052234 (tae)
LOC123188165 (tae)
LOC123425488 (hvu)
|
Subcellular
localization
wolf |
|
chlo 6,
E.R. 1,
nucl 1,
mito 1,
vacu 1,
golg 1,
E.R._plas 1,
cyto_E.R. 1
|
(predict for NP_194824.1)
|
|
Subcellular
localization
TargetP |
|
chlo 8
|
(predict for NP_194824.1)
|
|
| Gene coexpression |
Network*for
coexpressed
genes |
| KEGG* ID |
Title |
#genes |
Link to the KEGG* map
(Multiple genes) |
| ath03010 |
Ribosome |
8 |
 |
| ath00010 |
Glycolysis / Gluconeogenesis |
2 |
 |
| ath00710 |
Carbon fixation in photosynthetic organisms |
2 |
 |
| ath01200 |
Carbon metabolism |
2 |
 |
| ath01230 |
Biosynthesis of amino acids |
2 |
 |
Genes directly connected with FAD6 on the network
| coex z* |
Locus |
Function* |
CoexViewer |
Entrez Gene ID* |
| 9.8 |
APG1 |
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
[detail] |
825516 |
| 8.4 |
AT1G04420 |
NAD(P)-linked oxidoreductase superfamily protein |
[detail] |
839524 |
| 8.2 |
RBP31 |
31-kDa RNA binding protein |
[detail] |
828579 |
|
Coexpressed
gene list |
[Coexpressed gene list for FAD6]
|
| Gene expression |
| All samples |
[Expression pattern for all samples]
|
AtGenExpress*
(Development) |
253547_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress*
(Stress) |
253547_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress*
(Hormone) |
253547_at
X axis is samples (xls file), and Y axis is log-expression.
|
At4g30950 Gene
