[←][→] ath   AT4G31120 Gene
functional annotation
Function   SHK1 binding protein 1  
GO BP
GO:0010220 [list] [network] positive regulation of vernalization response  (3 genes)  IMP  
GO:0043985 [list] [network] histone H4-R3 methylation  (3 genes)  IMP  
GO:0035246 [list] [network] peptidyl-arginine N-methylation  (4 genes)  IEA  
GO:0034969 [list] [network] histone arginine methylation  (5 genes)  IBA  
GO:0009909 [list] [network] regulation of flower development  (157 genes)  IMP  
GO CC
GO:0005829 [list] [network] cytosol  (3506 genes)  IBA IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0008469 [list] [network] histone-arginine N-methyltransferase activity  (4 genes)  IBA  
GO:0008276 [list] [network] protein methyltransferase activity  (70 genes)  IDA  
KEGG ath03013 [list] [network] RNA transport (171 genes)
Protein NP_194841.2  NP_974647.1 
BLAST NP_194841.2  NP_974647.1 
Orthologous [Ortholog page] LOC4328251 (osa)  LOC7490510 (ppo)  LOC11431985 (mtr)  LOC100242249 (vvi)  LOC100273548 (zma)  LOC100383756 (zma)  LOC100782245 (gma)  LOC100815240 (gma)  LOC101255013 (sly)  LOC103834634 (bra)  LOC103862031 (bra) 
Subcellular
localization
wolf
cyto 6,  nucl 3,  cyto_pero 3,  cyto_E.R. 3,  cyto_plas 3  (predict for NP_194841.2)
cyto 6,  nucl 3  (predict for NP_974647.1)
Subcellular
localization
TargetP
other 8  (predict for NP_194841.2)
other 8  (predict for NP_974647.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 RNA transport 5
ath03015 mRNA surveillance pathway 2
ath01200 Carbon metabolism 2
Genes directly connected with SKB1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
12.7 AT1G06560 NOL1/NOP2/sun family protein [detail] 837167
10.8 AT3G14120 nuclear pore complex protein [detail] 820629
10.3 AT4G31810 ATP-dependent caseinolytic (Clp) protease/crotonase family protein [detail] 829310
9.7 ATWHY2 WHIRLY 2 [detail] 843467
9.3 AT1G63660 GMP synthase (glutamine-hydrolyzing), putative / glutamine amidotransferase [detail] 842670
8.6 SHM3 serine hydroxymethyltransferase 3 [detail] 829387
8.3 AT3G56900 Transducin/WD40 repeat-like superfamily protein [detail] 824857
8.1 AT3G57350 Nucleoporin interacting component (Nup93/Nic96-like) family protein [detail] 824902
7.6 EMB3127 Amino acid dehydrogenase family protein [detail] 825824
5.4 MSL10 mechanosensitive channel of small conductance-like 10 [detail] 831081
Coexpressed
gene list		 [Coexpressed gene list for SKB1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
253558_at
253558_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
253558_at
253558_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
253558_at
253558_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 829240      
Refseq ID (protein) NP_194841.2 
NP_974647.1 


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