[←][→] ath   At4g31120 Gene
functional annotation
Function   SHK1 binding protein 1    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0010220 [list] [network] positive regulation of vernalization response  (3 genes)  IMP  
GO:0043985 [list] [network] histone H4-R3 methylation  (3 genes)  IMP  
GO:0009909 [list] [network] regulation of flower development  (171 genes)  IMP  
GO CC
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
GO:0008276 [list] [network] protein methyltransferase activity  (44 genes)  IDA  
KEGG
Protein NP_194841.2  NP_974647.1 
BLAST NP_194841.2  NP_974647.1 
Orthologous [Ortholog page] LOC4328251 (osa)  LOC7490510 (ppo)  LOC11431985 (mtr)  LOC100782245 (gma)  LOC100815240 (gma)  LOC101255013 (sly)  LOC103834634 (bra)  LOC103862031 (bra)  LOC123132175 (tae)  LOC123136208 (tae)  LOC123143713 (tae)  LOC123401546 (hvu) 
Subcellular
localization
wolf
cyto 6,  nucl 3,  cyto_pero 3,  cyto_E.R. 3,  cyto_plas 3  (predict for NP_194841.2)
cyto 6,  nucl 3  (predict for NP_974647.1)
Subcellular
localization
TargetP
other 8  (predict for NP_194841.2)
other 8  (predict for NP_974647.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 4
ath03015 mRNA surveillance pathway 2
ath01230 Biosynthesis of amino acids 2
ath01240 Biosynthesis of cofactors 2
Genes directly connected with SKB1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
11.7 AT3G14120 nuclear pore complex protein [detail] 820629
11.4 AT1G06560 NOL1/NOP2/sun family protein [detail] 837167
11.1 ATWHY2 WHIRLY 2 [detail] 843467
9.3 SHM3 serine hydroxymethyltransferase 3 [detail] 829387
8.6 AT3G56900 Transducin/WD40 repeat-like superfamily protein [detail] 824857
7.9 AT3G57350 Nucleoporin interacting component (Nup93/Nic96-like) family protein [detail] 824902
7.4 AT5G23690 Polynucleotide adenylyltransferase family protein [detail] 832434
Coexpressed
gene list		 [Coexpressed gene list for SKB1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
253558_at
253558_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
253558_at
253558_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
253558_at
253558_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 829240      
Refseq ID (protein) NP_194841.2 
NP_974647.1 


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