[←][→] ath   AT4G31580 Gene
functional annotation
Function   serine/arginine-rich 22  
GO BP
GO:0000381 [list] [network] regulation of alternative mRNA splicing, via spliceosome  (30 genes)  IBA  
GO:0045292 [list] [network] mRNA cis splicing, via spliceosome  (38 genes)  IBA  
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (172 genes)  TAS  
GO:0008380 [list] [network] RNA splicing  (272 genes)  NAS  
GO CC
GO:0016607 [list] [network] nuclear speck  (86 genes)  IBA IDA  
GO:0005681 [list] [network] spliceosomal complex  (142 genes)  IEA  
GO:0005730 [list] [network] nucleolus  (477 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  RCA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA ISM  
GO MF
GO:0008270 [list] [network] zinc ion binding  (554 genes)  IEA  
GO:0003729 [list] [network] mRNA binding  (1026 genes)  IDA  
GO:0003723 [list] [network] RNA binding  (1790 genes)  IBA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath03040 [list] [network] Spliceosome (192 genes)
Protein NP_001078474.1  NP_194886.1 
BLAST NP_001078474.1  NP_194886.1 
Orthologous
Subcellular
localization
wolf
nucl 9  (predict for NP_001078474.1)
nucl 9  (predict for NP_194886.1)
Subcellular
localization
TargetP
other 7,  mito 3  (predict for NP_001078474.1)
other 7,  mito 3  (predict for NP_194886.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 11
ath03015 mRNA surveillance pathway 5
ath03013 RNA transport 4
Genes directly connected with RSZ22 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
11.3 RSZ22a RNA recognition motif and CCHC-type zinc finger domains containing protein [detail] 816995
10.5 AtRZ-1c RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein [detail] 830307
8.1 SR34a SER/ARG-rich protein 34A [detail] 824105
7.7 smB small nuclear ribonucleoprotein associated protein B [detail] 827792
7.3 AT5G02530 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 831923
7.1 AT3G01340 Transducin/WD40 repeat-like superfamily protein [detail] 821216
Coexpressed
gene list		 [Coexpressed gene list for RSZ22]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
253536_at
253536_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
253536_at
253536_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
253536_at
253536_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 829285      
Refseq ID (protein) NP_001078474.1 
NP_194886.1 


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