ATTED-II : GeneID search result

[←][→] ath AT4G31850 Gene

functional annotation

Function

proton gradient regulation 3

GO BP

GO:0043489 [list] [network] RNA stabilization	(8 genes)	IMP
GO:0006412 [list] [network] translation	(1149 genes)	IMP

GO CC

GO:0009507 [list] [network] chloroplast

(5095 genes)

IEA

GO MF

KEGG

Protein

NP_194913.1

BLAST

NP_194913.1

Orthologous

[Ortholog page] LOC4348654 (osa) LOC7468691 (ppo) LOC11431942 (mtr) LOC100247529 (vvi) LOC100778358 (gma) LOC101253773 (sly) LOC103639062 (zma) LOC103854836 (bra) LOC103854849 (bra) LOC103862089 (bra)

Subcellular
localization
wolf

cyto 5, cyto_nucl 4, E.R. 2, plas 1

(predict for NP_194913.1)

Subcellular
localization
TargetP

chlo 3

(predict for NP_194913.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with PGR3 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
11.6	AT4G30825	Tetratricopeptide repeat (TPR)-like superfamily protein	[detail]	829206
10.4	CRR21	Tetratricopeptide repeat (TPR)-like superfamily protein	[detail]	835668
9.9	EMB25	DEAD/DEAH box helicase	[detail]	843343
8.8	AT3G46610	Pentatricopeptide repeat (PPR-like) superfamily protein	[detail]	823814
7.9	AT3G04760	Pentatricopeptide repeat (PPR-like) superfamily protein	[detail]	819636
7.8	AT1G01970	Tetratricopeptide repeat (TPR)-like superfamily protein	[detail]	839299

Coexpressed
gene list

[Coexpressed gene list for PGR3]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

253495_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

253495_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

253495_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	829314
Refseq ID (protein)	NP_194913.1

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