[←][→] ath   At4g32770 Gene
functional annotation
Function   tocopherol cyclase, chloroplast / vitamin E deficient 1 (VTE1) / sucrose export defective 1 (SXD1)    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0009915 [list] [network] phloem sucrose loading  (3 genes)  IMP  
GO:0010189 [list] [network] vitamin E biosynthetic process  (10 genes)  IDA IEA  
GO:0016122 [list] [network] xanthophyll metabolic process  (15 genes)  IMP  
GO:0009644 [list] [network] response to high light intensity  (65 genes)  IEP  
GO:0015994 [list] [network] chlorophyll metabolic process  (122 genes)  IGI  
GO:0006631 [list] [network] fatty acid metabolic process  (214 genes)  IGI  
GO:0006979 [list] [network] response to oxidative stress  (545 genes)  IEP  
GO:0031347 [list] [network] regulation of defense response  (749 genes)  IMP  
GO:0009266 [list] [network] response to temperature stimulus  (843 genes)  IMP  
GO CC
GO:0010287 [list] [network] plastoglobule  (57 genes)  HDA IDA  
GO:0009706 [list] [network] chloroplast inner membrane  (61 genes)  TAS  
GO:0009534 [list] [network] chloroplast thylakoid  (415 genes)  HDA  
GO:0009941 [list] [network] chloroplast envelope  (582 genes)  HDA  
GO:0005886 [list] [network] plasma membrane  (2529 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA ISM ISS  
GO MF
GO:0009976 [list] [network] tocopherol cyclase activity  (1 genes)  IDA IMP  
KEGG ath00130 [list] [network] Ubiquinone and other terpenoid-quinone biosynthesis (39 genes)
ath01240 [list] [network] Biosynthesis of cofactors (236 genes)
Protein NP_567906.1 
BLAST NP_567906.1 
Orthologous [Ortholog page] LOC4329007 (osa)  LOC18107478 (ppo)  LOC25490120 (mtr)  LOC100791679 (gma)  LOC100809310 (gma)  LOC101263925 (sly)  LOC103862197 (bra)  LOC123052679 (tae)  LOC123128989 (tae)  LOC123181719 (tae)  LOC123441129 (hvu) 
Subcellular
localization
wolf
chlo 7,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for NP_567906.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_567906.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with VTE1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.2 FTSH8 FTSH protease 8 [detail] 837154
7.9 SQE3 squalene epoxidase 3 [detail] 829932
7.9 AT4G36530 alpha/beta-Hydrolases superfamily protein [detail] 829805
6.7 AT2G41040 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [detail] 818703
5.1 AT5G55570 uncharacterized protein [detail] 835651
4.1 AT3G51750 uncharacterized protein [detail] 824338
Coexpressed
gene list		 [Coexpressed gene list for VTE1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
253394_at
253394_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
253394_at
253394_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
253394_at
253394_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 829413      
Refseq ID (protein) NP_567906.1 


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