| functional annotation |
| Function |
uncharacterized protein |
|
| GO BP |
|
GO:0009646 [list] [network] response to absence of light
|
(50 genes)
|
IEP
|
 |
|
GO:0042752 [list] [network] regulation of circadian rhythm
|
(61 genes)
|
IMP
|
|
|
GO:0048573 [list] [network] photoperiodism, flowering
|
(94 genes)
|
IMP
|
|
|
GO:2000028 [list] [network] regulation of photoperiodism, flowering
|
(94 genes)
|
IMP
|
|
|
GO:0010114 [list] [network] response to red light
|
(101 genes)
|
IEP
|
|
|
GO:0009637 [list] [network] response to blue light
|
(160 genes)
|
IEP
|
|
|
GO:0045892 [list] [network] negative regulation of DNA-templated transcription
|
(205 genes)
|
IDA
|
|
|
GO:0009409 [list] [network] response to cold
|
(472 genes)
|
IEP
IMP
|
|
|
GO:0009737 [list] [network] response to abscisic acid
|
(1086 genes)
|
IEP
|
|
|
| GO CC |
|
| GO MF |
|
| KEGG |
|
|
| Protein |
NP_001190907.1
NP_567946.1
|
| BLAST |
NP_001190907.1
NP_567946.1
|
| Orthologous |
[Ortholog page]
LOC7457536 (ppo)
LOC11443438 (mtr)
LOC100801828 (gma)
LOC100806882 (gma)
LOC101251726 (sly)
LOC101264074 (sly)
LOC103834447 (bra)
LOC103842877 (bra)
LOC103862311 (bra)
|
Subcellular
localization
wolf |
|
nucl 6,
chlo 2,
extr 1
|
(predict for NP_001190907.1)
|
|
nucl 8,
chlo 1
|
(predict for NP_567946.1)
|
|
Subcellular
localization
TargetP |
|
other 8
|
(predict for NP_001190907.1)
|
|
other 8
|
(predict for NP_567946.1)
|
|
| Gene coexpression |
Network*for
coexpressed
genes |
| KEGG* ID |
Title |
#genes |
Link to the KEGG* map
(Multiple genes) |
| ath04712 |
Circadian rhythm - plant |
5 |
 |
Genes directly connected with AT4G33980 on the network
| coex z* |
Locus |
Function* |
CoexViewer |
Entrez Gene ID* |
| 17.7 |
COR27 |
cold regulated protein 27 |
[detail] |
834301 |
| 14.0 |
COL9 |
CONSTANS-like 9 |
[detail] |
819956 |
| 12.6 |
AT1G17665 |
CA-responsive protein |
[detail] |
838343 |
| 11.5 |
TOC1 |
CCT motif -containing response regulator protein |
[detail] |
836259 |
| 10.8 |
FKF1 |
flavin-binding, kelch repeat, f box 1 |
[detail] |
843133 |
| 9.6 |
ELF4 |
EARLY FLOWERING-like protein (DUF1313) |
[detail] |
818596 |
| 8.9 |
AT4G33985 |
membrane insertase, putative (DUF1685) |
[detail] |
829545 |
| 8.8 |
PCL1 |
Homeodomain-like superfamily protein |
[detail] |
823817 |
| 8.0 |
TAG1 |
membrane bound O-acyl transferase (MBOAT) family protein |
[detail] |
816464 |
| 7.1 |
HSFA8 |
heat shock transcription factor A8 |
[detail] |
843125 |
| 7.1 |
AT2G38465 |
uncharacterized protein |
[detail] |
818428 |
| 7.0 |
AT5G18540 |
E3 ubiquitin-protein ligase |
[detail] |
831972 |
| 6.5 |
CIPK21 |
CBL-interacting protein kinase 21 |
[detail] |
835868 |
| 6.5 |
AT3G59350 |
Protein kinase superfamily protein |
[detail] |
825104 |
| 6.1 |
AT5G50450 |
HCP-like superfamily protein with MYND-type zinc finger |
[detail] |
835113 |
|
Coexpressed
gene list |
[Coexpressed gene list for AT4G33980]
|
| Gene expression |
| All samples |
[Expression pattern for all samples]
|
AtGenExpress*
(Development) |
253322_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress*
(Stress) |
253322_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress*
(Hormone) |
253322_at
X axis is samples (xls file), and Y axis is log-expression.
|
At4g33980 Gene
