[][] ath   AT4G34030 Gene
functional annotation
Function   3-methylcrotonyl-CoA carboxylase
GO BP
GO:0006552 [list] [network] leucine catabolic process  (6 genes)  IBA IDA IEA  
GO CC
GO:1905202 [list] [network] methylcrotonoyl-CoA carboxylase complex  (1 genes)  IBA  
GO:0005759 [list] [network] mitochondrial matrix  (143 genes)  IEA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  HDA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  IBA IDA ISM TAS  
GO MF
GO:0004485 [list] [network] methylcrotonoyl-CoA carboxylase activity  (2 genes)  IBA  
GO:0050897 [list] [network] cobalt ion binding  (51 genes)  IDA  
GO:0008270 [list] [network] zinc ion binding  (554 genes)  IDA  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IEA  
KEGG ath00280 [list] [network] Valine, leucine and isoleucine degradation (51 genes)
Protein NP_567950.1 
BLAST NP_567950.1 
Orthologous [Ortholog page] LOC4345605 (osa)LOC7457538 (ppo)LOC11446438 (mtr)LOC100253805 (vvi)LOC100281617 (zma)LOC100777651 (gma)LOC101262668 (sly)LOC103834444 (bra)LOC103862316 (bra)
Subcellular
localization
wolf
mito 6,  chlo 3  (predict for NP_567950.1)
Subcellular
localization
TargetP
mito 8  (predict for NP_567950.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00280 Valine, leucine and isoleucine degradation 9
ath00640 Propanoate metabolism 5
ath00410 beta-Alanine metabolism 3
ath01200 Carbon metabolism 2
Genes directly connected with MCCB on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
11.1 MCCA methylcrotonyl-CoA carboxylase alpha chain [detail] 838362
10.8 BCE2 2-oxoacid dehydrogenases acyltransferase family protein [detail] 819869
9.4 IVD isovaleryl-CoA-dehydrogenase [detail] 823668
6.4 AT1G01770 propionyl-CoA carboxylase [detail] 837323
6.1 AT3G60510 ATP-dependent caseinolytic (Clp) protease/crotonase family protein [detail] 825222
5.8 AT5G51970 GroES-like zinc-binding alcohol dehydrogenase family protein [detail] 835272
5.4 AT5G11720 Glycosyl hydrolases family 31 protein [detail] 831044
Coexpressed
gene list
[Coexpressed gene list for MCCB]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
253279_at
253279_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
253279_at
253279_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
253279_at
253279_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 829549    
Refseq ID (protein) NP_567950.1 


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