[←][→] ath   At4g34110 Gene
functional annotation
Function   poly(A) binding protein 2    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:1900151 [list] [network] regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay  (1 genes)  IDA  
GO:0060211 [list] [network] regulation of nuclear-transcribed mRNA poly(A) tail shortening  (2 genes)  IDA  
GO:0006446 [list] [network] regulation of translational initiation  (3 genes)  IDA  
GO:0006413 [list] [network] translational initiation  (19 genes)  ISS  
GO CC
GO:0005886 [list] [network] plasma membrane  (2529 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  ISM  
GO MF
GO:0003743 [list] [network] translation initiation factor activity  (35 genes)  ISS  
GO:0003729 [list] [network] mRNA binding  (1535 genes)  HDA IDA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG ath03015 [list] [network] mRNA surveillance pathway (119 genes)
ath03018 [list] [network] RNA degradation (113 genes)
Protein NP_195137.5 
BLAST NP_195137.5 
Orthologous [Ortholog page] LOC543264 (tae)  PAB4 (ath)  PAB3 (ath)  PAB1 (ath)  PAB8 (ath)  PAB5 (ath)  LOC4336331 (osa)  LOC4341408 (osa)  LOC4345242 (osa)  LOC4346409 (osa)  LOC7462869 (ppo)  LOC7467793 (ppo)  LOC7490046 (ppo)  LOC7492048 (ppo)  LOC7492495 (ppo)  LOC11419187 (mtr)  LOC11429679 (mtr)  LOC11445084 (mtr)  LOC18104862 (ppo)  LOC25485028 (mtr)  LOC100778879 (gma)  LOC100780329 (gma)  LOC100783163 (gma)  LOC100784442 (gma)  LOC100798998 (gma)  LOC100799386 (gma)  LOC100808877 (gma)  LOC100811385 (gma)  LOC100813735 (gma)  LOC101258105 (sly)  LOC101261596 (sly)  LOC101264108 (sly)  LOC101669840 (tae)  LOC103830833 (bra)  LOC103831686 (bra)  LOC103834441 (bra)  LOC103835691 (bra)  LOC103842244 (bra)  LOC103842418 (bra)  LOC103844362 (bra)  LOC103860422 (bra)  LOC103864463 (bra)  LOC103871402 (bra)  LOC112422765 (mtr)  LOC120575892 (mtr)  LOC120577874 (mtr)  LOC120580863 (mtr)  LOC120580892 (mtr)  LOC120580893 (mtr)  LOC123053837 (tae)  LOC123057824 (tae)  LOC123057826 (tae)  LOC123064827 (tae)  LOC123073987 (tae)  LOC123111491 (tae)  LOC123120701 (tae)  LOC123168751 (tae)  LOC123189697 (tae)  LOC123398305 (hvu)  LOC123411286 (hvu)  LOC123427184 (hvu) 
Subcellular
localization
wolf
nucl 4,  cyto_nucl 3,  pero 2,  cyto 1,  chlo 1,  mito 1,  E.R. 1,  chlo_mito 1  (predict for NP_195137.5)
Subcellular
localization
TargetP
other 4,  mito 4  (predict for NP_195137.5)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 2
ath00620 Pyruvate metabolism 2
ath01200 Carbon metabolism 2
ath03013 Nucleocytoplasmic transport 2
ath03015 mRNA surveillance pathway 2
Genes directly connected with PAB2 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.7 NADP-ME4 NADP-malic enzyme 4 [detail] 844314
6.3 PAB4 poly(A) binding protein 4 [detail] 816867
5.9 eIFiso4G1 MIF4G domain-containing protein / MA3 domain-containing protein [detail] 835897
5.7 UBP1A oligouridylate-binding protein 1A [detail] 841846
Coexpressed
gene list		 [Coexpressed gene list for PAB2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
253280_at
253280_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
253280_at
253280_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
253280_at
253280_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 829557      
Refseq ID (protein) NP_195137.5 


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