[←][→] ath   At4g34200 Gene
functional annotation
Function   D-3-phosphoglycerate dehydrogenase    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0006564 [list] [network] L-serine biosynthetic process  (6 genes)  IEA  
GO:0000096 [list] [network] sulfur amino acid metabolic process  (36 genes)  IMP  
GO:0009561 [list] [network] megagametogenesis  (80 genes)  IMP  
GO:0009555 [list] [network] pollen development  (376 genes)  IMP  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (697 genes)  IMP  
GO CC
GO:0009570 [list] [network] chloroplast stroma  (705 genes)  HDA  
GO:0005886 [list] [network] plasma membrane  (2529 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  RCA  
GO:0005739 [list] [network] mitochondrion  (4228 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA ISM  
GO:0009536 [list] [network] plastid  (5425 genes)  HDA IDA  
GO MF
GO:0004617 [list] [network] phosphoglycerate dehydrogenase activity  (2 genes)  IMP  
GO:0005524 [list] [network] ATP binding  (253 genes)  HDA  
KEGG ath00260 [list] [network] Glycine, serine and threonine metabolism (70 genes)
ath00270 [list] [network] Cysteine and methionine metabolism (124 genes)
ath01200 [list] [network] Carbon metabolism (273 genes)
ath01230 [list] [network] Biosynthesis of amino acids (244 genes)
Protein NP_195146.1 
BLAST NP_195146.1 
Orthologous [Ortholog page] AT3G19480 (ath)  PGDH (ath)  LOC4337230 (osa)  LOC4341713 (osa)  LOC4345710 (osa)  LOC7472681 (ppo)  LOC7490061 (ppo)  LOC7490861 (ppo)  LOC7491573 (ppo)  LOC7492063 (ppo)  LOC11434383 (mtr)  LOC18104837 (ppo)  LOC25485421 (mtr)  LOC100793819 (gma)  LOC100808771 (gma)  LOC100817949 (gma)  LOC100819264 (gma)  LOC101246616 (sly)  LOC101254848 (sly)  LOC101266918 (sly)  LOC103834426 (bra)  LOC103835943 (bra)  LOC103840754 (bra)  LOC103859810 (bra)  LOC103862328 (bra)  LOC123047083 (tae)  LOC123054906 (tae)  LOC123128760 (tae)  LOC123138775 (tae)  LOC123159608 (tae)  LOC123166656 (tae)  LOC123181697 (tae)  LOC123190747 (tae)  LOC123396582 (hvu)  LOC123400465 (hvu)  LOC123408590 (hvu)  LOC123428120 (hvu)  LOC123439600 (hvu) 
Subcellular
localization
wolf
chlo 10  (predict for NP_195146.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_195146.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 11
ath00270 Cysteine and methionine metabolism 8
ath01200 Carbon metabolism 8
ath01240 Biosynthesis of cofactors 6
ath00260 Glycine, serine and threonine metabolism 5
Genes directly connected with EDA9 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.5 PSAT phosphoserine aminotransferase [detail] 829715
8.1 LAP1 Cytosol aminopeptidase family protein [detail] 816954
6.8 HOG1 S-adenosyl-L-homocysteine hydrolase [detail] 827028
5.2 GAPCP-2 glyceraldehyde-3-phosphate dehydrogenase of plastid 2 [detail] 838199
4.8 NTT1 nucleotide transporter 1 [detail] 844370
Coexpressed
gene list		 [Coexpressed gene list for EDA9]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
253274_at
253274_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
253274_at
253274_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
253274_at
253274_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 829568      
Refseq ID (protein) NP_195146.1 


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