[←][→] ath   At4g34620 Gene
functional annotation
Function   small subunit ribosomal protein 16    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0009793 [list] [network] embryo development ending in seed dormancy  (697 genes)  IMP  
GO:0006412 [list] [network] translation  (911 genes)  IEA  
GO CC
GO:0005840 [list] [network] ribosome  (322 genes)  TAS  
GO:0009941 [list] [network] chloroplast envelope  (582 genes)  HDA  
GO:0005886 [list] [network] plasma membrane  (2529 genes)  HDA  
GO:0005739 [list] [network] mitochondrion  (4228 genes)  ISM  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA  
GO:0009536 [list] [network] plastid  (5425 genes)  IDA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (63 genes)  ISS  
GO:0003729 [list] [network] mRNA binding  (1535 genes)  IDA  
KEGG ath03010 [list] [network] Ribosome (359 genes)
Protein NP_195188.1 
BLAST NP_195188.1 
Orthologous [Ortholog page] AT5G56940 (ath)  LOC4346044 (osa)  LOC4347467 (osa)  LOC11438462 (mtr)  LOC11443660 (mtr)  LOC18098259 (ppo)  LOC18104602 (ppo)  rps16 (sly)  LOC100305630 (gma)  LOC100499851 (gma)  LOC103836333 (bra)  LOC103845127 (bra)  LOC103851798 (bra)  LOC123104242 (tae)  LOC123112498 (tae)  LOC123122005 (tae)  LOC123174551 (tae)  LOC123180297 (tae)  LOC123399593 (hvu) 
Subcellular
localization
wolf
cyto 4,  chlo 2,  nucl 2,  mito 2,  chlo_mito 2  (predict for NP_195188.1)
Subcellular
localization
TargetP
mito 8  (predict for NP_195188.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 8
Genes directly connected with SSR16 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
12.0 AT5G65220 Ribosomal L29 family protein [detail] 836647
11.4 PSRP5 plastid-specific 50S ribosomal protein 5 [detail] 824858
9.3 AT1G01170 ozone-responsive stress-like protein (DUF1138) [detail] 839263
Coexpressed
gene list		 [Coexpressed gene list for SSR16]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
253201_at
253201_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
253201_at
253201_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
253201_at
253201_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 829614      
Refseq ID (protein) NP_195188.1 


The preparation time of this page was 0.9 [sec].