[][] ath   AT4G34620 Gene
functional annotation
Function   small subunit ribosomal protein 16
GO BP
GO:0009793 [list] [network] embryo development ending in seed dormancy  (547 genes)  IMP  
GO:0006412 [list] [network] translation  (1149 genes)  IEA  
GO CC
GO:0005840 [list] [network] ribosome  (463 genes)  TAS  
GO:0009941 [list] [network] chloroplast envelope  (666 genes)  IDA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  HDA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  ISM  
GO:0009507 [list] [network] chloroplast  (5095 genes)  IDA  
GO:0009536 [list] [network] plastid  (5519 genes)  IDA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (248 genes)  IBA ISS  
KEGG ath03010 [list] [network] Ribosome (356 genes)
Protein NP_195188.1 
BLAST NP_195188.1 
Orthologous [Ortholog page] LOC103836333 (bra)
Subcellular
localization
wolf
cyto 4,  chlo 2,  nucl 2,  mito 2,  chlo_mito 2  (predict for NP_195188.1)
Subcellular
localization
TargetP
mito 8  (predict for NP_195188.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 10
Genes directly connected with SSR16 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
9.6 PSRP5 plastid-specific 50S ribosomal protein 5 [detail] 824858
9.6 AT5G65220 Ribosomal L29 family protein [detail] 836647
8.8 emb2184 Ribosomal protein L31 [detail] 843871
7.8 AT1G01170 ozone-responsive stress-like protein (DUF1138) [detail] 839263
Coexpressed
gene list
[Coexpressed gene list for SSR16]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
253201_at
253201_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
253201_at
253201_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
253201_at
253201_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 829614    
Refseq ID (protein) NP_195188.1 


The preparation time of this page was 0.2 [sec].