[←][→] ath   At4g35540 Gene
functional annotation
Function   POLLEN-EXPRESSED TRANSCRIPTION FACTOR 2    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0009846 [list] [network] pollen germination  (80 genes)  IMP  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (697 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA ISM  
GO MF
GO:0001093 [list] [network] TFIIB-class transcription factor binding  (1 genes)  IDA  
GO:0070063 [list] [network] RNA polymerase binding  (7 genes)  IDA  
GO:0042803 [list] [network] protein homodimerization activity  (227 genes)  IPI  
GO:0003690 [list] [network] double-stranded DNA binding  (789 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_195279.1 
BLAST NP_195279.1 
Orthologous [Ortholog page] LOC4346140 (osa)  LOC7493571 (ppo)  LOC11417451 (mtr)  LOC100796841 (gma)  LOC100811830 (gma)  LOC101252255 (sly)  LOC103875157 (bra)  LOC123111971 (tae)  LOC123136771 (tae)  LOC123151924 (tae)  LOC123157861 (tae)  LOC123411934 (hvu) 
Subcellular
localization
wolf
cyto 4,  nucl 3,  E.R. 1,  cysk_nucl 1  (predict for NP_195279.1)
Subcellular
localization
TargetP
other 8  (predict for NP_195279.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
Genes directly connected with AT4G35540 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.3 AT1G55460 DNA/RNA-binding protein Kin17, conserved region [detail] 841993
6.9 AT2G35540 DNAJ heat shock N-terminal domain-containing protein [detail] 818119
6.7 AT5G49000 Galactose oxidase/kelch repeat superfamily protein [detail] 834959
Coexpressed
gene list		 [Coexpressed gene list for AT4G35540]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
253144_at
253144_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
253144_at
253144_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
253144_at
253144_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 829706      
Refseq ID (protein) NP_195279.1 


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