ATTED-II : GeneID search result

[←][→] ath At4g36360 Gene

functional annotation

Function

beta-galactosidase 3

GO BP

GO:0009933 [list] [network] meristem structural organization	(66 genes)	IEA
GO:0009834 [list] [network] plant-type secondary cell wall biogenesis	(97 genes)	IEA
GO:0009812 [list] [network] flavonoid metabolic process	(131 genes)	IEA
GO:1903046 [list] [network] meiotic cell cycle process	(255 genes)	IEA
GO:0051301 [list] [network] cell division	(442 genes)	IEA
GO:0051239 [list] [network] regulation of multicellular organismal process	(657 genes)	IEA
GO:0005975 [list] [network] carbohydrate metabolic process	(844 genes)	IEA
GO:0043436 [list] [network] oxoacid metabolic process	(1714 genes)	IEA

GO CC

GO:0009505 [list] [network] plant-type cell wall	(498 genes)	IDA
GO:0005886 [list] [network] plasma membrane	(2529 genes)	HDA
GO:0005576 [list] [network] extracellular region	(3154 genes)	ISM

GO MF

GO:0004565 [list] [network] beta-galactosidase activity

(12 genes)

IDA

KEGG

Protein

NP_568001.1 NP_849506.1

BLAST

NP_568001.1 NP_849506.1

Orthologous

[Ortholog page] TBG3 (sly) TBG6 (sly) TBG4 (sly) TBG1 (sly) BGAL1 (ath) BGAL2 (ath) BGAL12 (ath) BGAL4 (ath) BGAL5 (ath) LOC4324191 (osa) LOC4328745 (osa) LOC4331730 (osa) LOC4341358 (osa) LOC7470014 (ppo) LOC7480151 (ppo) LOC7493931 (ppo) LOC7497590 (ppo) LOC11405663 (mtr) LOC11414214 (mtr) LOC11419221 (mtr) LOC11441599 (mtr) LOC11441981 (mtr) LOC18094855 (ppo) LOC18096747 (ppo) LOC25490234 (mtr) LOC25500443 (mtr) LOC100780897 (gma) LOC100781074 (gma) LOC100781959 (gma) LOC100785688 (gma) LOC100787084 (gma) LOC100792629 (gma) LOC100795144 (gma) LOC100798501 (gma) LOC100804103 (gma) LOC100810170 (gma) LOC100811187 (gma) LOC100814111 (gma) LOC100818981 (gma) LOC101245759 (sly) LOC101258163 (sly) LOC103833120 (bra) LOC103842580 (bra) LOC103851804 (bra) LOC103854367 (bra) LOC103856789 (bra) LOC103861613 (bra) LOC103863929 (bra) LOC103868724 (bra) LOC103870099 (bra) LOC103872148 (bra) LOC104645427 (sly) LOC106795462 (gma) LOC120577612 (mtr) LOC123061350 (tae) LOC123069989 (tae) LOC123093264 (tae) LOC123098531 (tae) LOC123127316 (tae) LOC123136993 (tae) LOC123144393 (tae) LOC123148048 (tae) LOC123159577 (tae) LOC123165480 (tae) LOC123402796 (hvu) LOC123411615 (hvu) LOC123443769 (hvu) LOC123449529 (hvu)

Subcellular
localization
wolf

chlo 2, vacu 2, cyto 1, extr 1, chlo_mito 1, E.R._vacu 1	(predict for NP_568001.1)
chlo 2, vacu 2, cyto 1, extr 1, chlo_mito 1, E.R._vacu 1	(predict for NP_849506.1)

Subcellular
localization
TargetP

scret 8	(predict for NP_568001.1)
scret 8	(predict for NP_849506.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00040	Pentose and glucuronate interconversions	3

Genes directly connected with BGAL3 on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
11.7	GH9C2	glycosyl hydrolase 9C2	[detail]	842747
7.6	GH9B8	glycosyl hydrolase 9B8	[detail]	817861
7.5	CSLC5	Cellulose-synthase-like C5	[detail]	829286
7.4	AT4G13990	Exostosin family protein	[detail]	827035
7.3	AT1G04680	Pectin lyase-like superfamily protein	[detail]	839452
6.7	SKS6	SKU5-similar 6	[detail]	840792
5.6	AT2G38010	Neutral/alkaline non-lysosomal ceramidase	[detail]	818379
5.4	AT1G33170	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein	[detail]	840213

Coexpressed
gene list

[Coexpressed gene list for BGAL3]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

253090_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

253090_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

253090_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	829788
Refseq ID (protein)	NP_568001.1
Refseq ID (protein)	NP_849506.1

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