[←][→] ath   At4g36650 Gene
functional annotation
Function   plant-specific TFIIB-related protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO CC
GO:0009527 [list] [network] plastid outer membrane  (52 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0000182 [list] [network] rDNA binding  (2 genes)  IDA  
KEGG ath03022 [list] [network] Basal transcription factors (55 genes)
Protein NP_001078502.4  NP_195383.1 
BLAST NP_001078502.4  NP_195383.1 
Orthologous [Ortholog page] LOC4331943 (osa)  LOC7473161 (ppo)  LOC11411099 (mtr)  LOC100815371 (gma)  LOC101254048 (sly)  LOC102662353 (gma)  LOC103862482 (bra)  LOC123084951 (tae)  LOC123093125 (tae)  LOC123098395 (tae)  LOC123449434 (hvu) 
Subcellular
localization
wolf
nucl 6,  cyto_nucl 4,  chlo 2,  chlo_mito 1  (predict for NP_001078502.4)
nucl 5,  chlo 4,  cyto_nucl 3,  chlo_mito 2  (predict for NP_195383.1)
Subcellular
localization
TargetP
mito 5,  chlo 4  (predict for NP_001078502.4)
mito 5,  chlo 4  (predict for NP_195383.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 3
ath03250 Viral life cycle - HIV-1 2
Genes directly connected with PBRP on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.2 EXT-like hydroxyproline-rich glycoprotein family protein [detail] 828782
6.7 AT5G41100 hydroxyproline-rich glycoprotein family protein [detail] 834112
6.3 AT2G27260 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [detail] 817268
6.0 AT1G75230 DNA glycosylase superfamily protein [detail] 843860
5.7 AT4G17950 AT hook motif DNA-binding family protein [detail] 827520
Coexpressed
gene list		 [Coexpressed gene list for PBRP]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
246255_at
246255_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
246255_at
246255_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
246255_at
246255_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 829817      
Refseq ID (protein) NP_001078502.4 
NP_195383.1 


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