[←][→] ath   At4g36980 Gene
functional annotation
Function   CLK4-associating serine/arginine-rich protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0009908 [list] [network] flower development  (492 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
KEGG
Protein NP_001078505.1  NP_001190939.1  NP_001190940.1  NP_195415.6 
BLAST NP_001078505.1  NP_001190939.1  NP_001190940.1  NP_195415.6 
Orthologous [Ortholog page] LOC7462611 (ppo)  LOC7476382 (ppo)  LOC9268882 (osa)  LOC11426280 (mtr)  LOC100779007 (gma)  LOC100792600 (gma)  LOC101243842 (sly)  LOC103862710 (bra)  LOC123085933 (tae)  LOC123092129 (tae)  LOC123096996 (tae)  LOC123448523 (hvu) 
Subcellular
localization
wolf
nucl 9  (predict for NP_001078505.1)
nucl 9  (predict for NP_001190939.1)
nucl 9  (predict for NP_001190940.1)
nucl 9  (predict for NP_195415.6)
Subcellular
localization
TargetP
mito 6,  other 5  (predict for NP_001078505.1)
mito 6,  other 5  (predict for NP_001190939.1)
mito 6,  other 5  (predict for NP_001190940.1)
mito 6,  other 5  (predict for NP_195415.6)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
Genes directly connected with AT4G36980 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
14.6 AT1G70620 cyclin-like protein [detail] 843399
12.4 AT5G25560 CHY-type/CTCHY-type/RING-type Zinc finger protein [detail] 832631
12.1 AT1G10890 arginine/glutamate-rich 1 protein [detail] 837632
12.0 AT1G60200 splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing protein [detail] 842315
11.6 EMB2820 Cytidine/deoxycytidylate deaminase family protein [detail] 832539
10.7 AT5G58200 Calcineurin-like metallo-phosphoesterase superfamily protein [detail] 835932
10.6 U1-70K U1 small nuclear ribonucleoprotein-70K [detail] 824230
10.1 AT2G25590 Plant Tudor-like protein [detail] 817098
9.9 AT3G02300 Regulator of chromosome condensation (RCC1) family protein [detail] 821167
9.7 AT4G00040 Chalcone and stilbene synthase family protein [detail] 828224
9.7 AT1G53780 26S proteasome regulatory complex ATPase [detail] 841815
9.0 AT1G27520 Glycosyl hydrolase family 47 protein [detail] 839643
9.0 AT5G27860 uncharacterized protein [detail] 832849
8.9 AT1G19485 Transducin/WD40 repeat-like superfamily protein [detail] 838534
8.5 AT1G50970 Membrane trafficking VPS53 family protein [detail] 841519
8.3 AT1G02960 kinetochore protein [detail] 839363
7.6 AT5G25270 Ubiquitin-like superfamily protein [detail] 832599
7.5 CID4 CTC-interacting domain 4 [detail] 820615
7.1 AT1G76720 eukaryotic translation initiation factor 2 (eIF-2) family protein [detail] 844006
7.1 XPB1 DNA repair helicase XPB1-like protein [detail] 834139
6.5 APRR8 pseudo-response regulator 8 [detail] 828011
6.1 SBT3.12 subtilase 3.12 [detail] 827882
5.9 AT1G29560 Zinc finger C-x8-C-x5-C-x3-H type family protein [detail] 839833
5.9 AT5G58980 Neutral/alkaline non-lysosomal ceramidase [detail] 836015
5.6 AT2G45920 U-box domain-containing protein [detail] 819200
Coexpressed
gene list		 [Coexpressed gene list for AT4G36980]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
246285_at
246285_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
246285_at
246285_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
246285_at
246285_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 829852      
Refseq ID (protein) NP_001078505.1 
NP_001190939.1 
NP_001190940.1 
NP_195415.6 


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