| functional annotation |
| Function |
CLK4-associating serine/arginine-rich protein |
|
| GO BP |
|
| GO CC |
|
| GO MF |
|
| KEGG |
|
|
| Protein |
NP_001078505.1
NP_001190939.1
NP_001190940.1
NP_195415.6
|
| BLAST |
NP_001078505.1
NP_001190939.1
NP_001190940.1
NP_195415.6
|
| Orthologous |
[Ortholog page]
LOC7462611 (ppo)
LOC9268882 (osa)
LOC11426280 (mtr)
LOC100267903 (vvi)
LOC100279962 (zma)
LOC100779007 (gma)
LOC100792600 (gma)
LOC101243842 (sly)
LOC103862710 (bra)
|
Subcellular
localization
wolf |
|
nucl 9
|
(predict for NP_001078505.1)
|
|
nucl 9
|
(predict for NP_001190939.1)
|
|
nucl 9
|
(predict for NP_001190940.1)
|
|
nucl 9
|
(predict for NP_195415.6)
|
|
Subcellular
localization
TargetP |
|
mito 6,
other 5
|
(predict for NP_001078505.1)
|
|
mito 6,
other 5
|
(predict for NP_001190939.1)
|
|
mito 6,
other 5
|
(predict for NP_001190940.1)
|
|
mito 6,
other 5
|
(predict for NP_195415.6)
|
|
| Gene coexpression |
Network*for
coexpressed
genes |
| KEGG* ID |
Title |
#genes |
Link to the KEGG* map
(Multiple genes) |
| ath03040 |
Spliceosome |
3 |
 |
Genes directly connected with AT4G36980 on the network
| coex z* |
Locus |
Function* |
Coexpression
detail |
Entrez Gene ID* |
| 13.4 |
AT1G70620 |
cyclin-like protein |
[detail] |
843399 |
| 12.3 |
AT1G10890 |
arginine/glutamate-rich 1 protein |
[detail] |
837632 |
| 11.4 |
AT1G60200 |
splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing protein |
[detail] |
842315 |
| 10.5 |
AT5G25560 |
CHY-type/CTCHY-type/RING-type Zinc finger protein |
[detail] |
832631 |
| 9.4 |
U1-70K |
U1 small nuclear ribonucleoprotein-70K |
[detail] |
824230 |
| 9.4 |
AT1G60900 |
U2 snRNP auxilliary factor, large subunit, splicing factor |
[detail] |
842382 |
| 9.1 |
AT5G09880 |
Splicing factor, CC1-like protein |
[detail] |
830848 |
| 9.0 |
AT5G58200 |
Calcineurin-like metallo-phosphoesterase superfamily protein |
[detail] |
835932 |
| 8.7 |
AT4G00040 |
Chalcone and stilbene synthase family protein |
[detail] |
828224 |
| 8.5 |
AT3G02300 |
Regulator of chromosome condensation (RCC1) family protein |
[detail] |
821167 |
| 8.5 |
AT1G53780 |
26S proteasome regulatory complex ATPase |
[detail] |
841815 |
| 8.4 |
RIK |
RS2-interacting KH protein |
[detail] |
822600 |
| 8.1 |
CID4 |
CTC-interacting domain 4 |
[detail] |
820615 |
| 8.0 |
EMB2820 |
Cytidine/deoxycytidylate deaminase family protein |
[detail] |
832539 |
| 7.7 |
AT5G25270 |
Ubiquitin-like superfamily protein |
[detail] |
832599 |
| 6.8 |
AT1G50970 |
Membrane trafficking VPS53 family protein |
[detail] |
841519 |
| 6.8 |
APRR8 |
pseudo-response regulator 8 |
[detail] |
828011 |
| 5.8 |
AT4G23330 |
hypothetical protein |
[detail] |
828432 |
| 5.7 |
SBT3.12 |
subtilase 3.12 |
[detail] |
827882 |
| 4.9 |
AT1G29560 |
Zinc finger C-x8-C-x5-C-x3-H type family protein |
[detail] |
839833 |
| 4.6 |
AT2G45920 |
U-box domain-containing protein |
[detail] |
819200 |
|
Coexpressed
gene list |
[Coexpressed gene list for AT4G36980]
|
| Gene expression |
| All samples |
[Expression pattern for all samples]
|
AtGenExpress*
(Development) |
246285_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress*
(Stress) |
246285_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress*
(Hormone) |
246285_at
X axis is samples (xls file), and Y axis is log-expression.
|
AT4G36980 Gene
