[←][→] ath   At4g38160 Gene
functional annotation
Function   Mitochondrial transcription termination factor family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0008033 [list] [network] tRNA processing  (52 genes)  IMP  
GO:0009658 [list] [network] chloroplast organization  (209 genes)  IMP  
GO CC
GO:0042651 [list] [network] thylakoid membrane  (350 genes)  IDA  
GO:0005739 [list] [network] mitochondrion  (4228 genes)  IDA ISM  
GO:0009507 [list] [network] chloroplast  (5004 genes)  IDA ISM  
GO MF
GO:0003727 [list] [network] single-stranded RNA binding  (55 genes)  IDA  
GO:0003690 [list] [network] double-stranded DNA binding  (789 genes)  IDA IEA  
GO:0003677 [list] [network] DNA binding  (1277 genes)  IDA  
GO:0003723 [list] [network] RNA binding  (1729 genes)  IDA  
KEGG
Protein NP_001190948.1  NP_001320159.1  NP_195529.1  NP_974703.1 
BLAST NP_001190948.1  NP_001320159.1  NP_195529.1  NP_974703.1 
Orthologous [Ortholog page] LOC4346032 (osa)  LOC7463348 (ppo)  LOC25492996 (mtr)  LOC100793256 (gma)  LOC100816929 (gma)  LOC101248448 (sly)  LOC103860753 (bra)  LOC112327152 (ppo)  LOC123151356 (tae)  LOC123157755 (tae)  LOC123164972 (tae)  LOC123411124 (hvu) 
Subcellular
localization
wolf
cyto 5,  chlo 2,  pero 2  (predict for NP_001190948.1)
chlo 4,  cyto 4,  nucl 1,  extr 1,  pero 1  (predict for NP_001320159.1)
chlo 4,  cyto 4,  nucl 1,  extr 1,  pero 1  (predict for NP_195529.1)
chlo 5,  cyto 4,  nucl 1,  pero 1  (predict for NP_974703.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001190948.1)
other 9  (predict for NP_001320159.1)
other 9  (predict for NP_195529.1)
other 9  (predict for NP_974703.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with pde191 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.8 AT2G44640 TRIGALACTOSYLDIACYLGLYCEROL-like protein [detail] 819072
8.4 AT4G26370 antitermination NusB domain-containing protein [detail] 828743
8.3 AT1G02150 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 839577
7.5 SCY1 SECY homolog 1 [detail] 816386
6.9 PAM68 PAM68-like protein (DUF3464) [detail] 2745715
6.5 AT5G58480 O-Glycosyl hydrolases family 17 protein [detail] 835961
5.8 AT5G09315 vacuolar sorting protein 9 domain protein [detail] 28721089
Coexpressed
gene list		 [Coexpressed gene list for pde191]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
253028_at
253028_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
253028_at
253028_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
253028_at
253028_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 829972      
Refseq ID (protein) NP_001190948.1 
NP_001320159.1 
NP_195529.1 
NP_974703.1 


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