[][] ath   AT4G38890 Gene
functional annotation
Function   FMN-linked oxidoreductases superfamily protein
GO BP
GO:0055114 [list] [network] oxidation-reduction process  (1468 genes)  IEA  
GO CC
GO:0005773 [list] [network] vacuole  (1133 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  RCA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0017150 [list] [network] tRNA dihydrouridine synthase activity  (5 genes)  IBA  
GO:0050660 [list] [network] flavin adenine dinucleotide binding  (147 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG
Protein NP_195600.2 
BLAST NP_195600.2 
Orthologous [Ortholog page] LOC4334955 (osa)LOC11418223 (mtr)LOC100262408 (vvi)LOC100279244 (zma)LOC100783494 (gma)LOC101268622 (sly)LOC103860413 (bra)
Subcellular
localization
wolf
nucl 9  (predict for NP_195600.2)
Subcellular
localization
TargetP
other 8  (predict for NP_195600.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 4
ath03008 Ribosome biogenesis in eukaryotes 2
Genes directly connected with AT4G38890 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
8.6 PRMT11 arginine methyltransferase 11 [detail] 829072
7.0 ATKRS-1 lysyl-tRNA synthetase 1 [detail] 820343
7.0 PUM24 pumilio 24 [detail] 820934
5.8 ORC5 origin recognition complex protein 5 [detail] 829114
5.8 AT5G58450 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 835958
5.5 AT1G22660 Polynucleotide adenylyltransferase family protein [detail] 838872
Coexpressed
gene list
[Coexpressed gene list for AT4G38890]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252968_at
252968_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252968_at
252968_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
252968_at
252968_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 830044    
Refseq ID (protein) NP_195600.2 


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