[][] ath   AT4G39090 Gene
functional annotation
Function   Papain family cysteine protease
GO BP
GO:0009269 [list] [network] response to desiccation  (24 genes)  IEP  
GO:0009414 [list] [network] response to water deprivation  (361 genes)  TAS  
GO:0042742 [list] [network] defense response to bacterium  (399 genes)  IMP  
GO:0009651 [list] [network] response to salt stress  (485 genes)  IEP  
GO:0051603 [list] [network] proteolysis involved in cellular protein catabolic process  (524 genes)  IBA  
GO:0006970 [list] [network] response to osmotic stress  (563 genes)  IGI  
GO CC
GO:0005764 [list] [network] lysosome  (45 genes)  IBA  
GO:0000323 [list] [network] lytic vacuole  (48 genes)  IDA  
GO:0005615 [list] [network] extracellular space  (167 genes)  IBA  
GO:0005773 [list] [network] vacuole  (1133 genes)  IDA  
GO:0005576 [list] [network] extracellular region  (3363 genes)  ISM  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA  
GO MF
GO:0004197 [list] [network] cysteine-type endopeptidase activity  (66 genes)  IBA ISS  
KEGG ath04626 [list] [network] Plant-pathogen interaction (170 genes)
Protein NP_568052.1 
BLAST NP_568052.1 
Orthologous [Ortholog page] LOC542701 (zma)LOC544144 (sly)LOC547893 (gma)AT2G21430 (ath)AT4G16190 (ath)LOC4329339 (osa)LOC4335455 (osa)LOC7461242 (ppo)LOC7479706 (ppo)LOC7493938 (ppo)LOC11414263 (mtr)LOC11444338 (mtr)LOC100233020 (vvi)CYSP (vvi)LOC100245344 (vvi)LOC100248853 (vvi)LOC100250475 (vvi)LOC100779565 (gma)LOC100791283 (gma)LOC100791503 (gma)LOC100812198 (gma)LOC101258107 (sly)LOC103835145 (bra)LOC103864272 (bra)LOC103870004 (bra)LOC103873055 (bra)
Subcellular
localization
wolf
vacu 5,  extr 3,  golg 1  (predict for NP_568052.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_568052.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with RD19 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
7.3 RD21A Granulin repeat cysteine protease family protein [detail] 841122
7.0 GAMMA-VPE gamma vacuolar processing enzyme [detail] 829431
6.1 AT1G21680 DPP6 N-terminal domain-like protein [detail] 838770
5.4 AT4G02370 pectinesterase (Protein of unknown function, DUF538) [detail] 828057
5.3 AT2G21430 Papain family cysteine protease [detail] 816682
4.4 RD21B Granulin repeat cysteine protease family protein [detail] 834321
Coexpressed
gene list
[Coexpressed gene list for RD19]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252927_at
252927_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252927_at
252927_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
252927_at
252927_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 830064    
Refseq ID (protein) NP_568052.1 


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