[][] ath   At4g39370 Gene
functional annotation
Function   ubiquitin-specific protease 27 Plant GARDENPlant GARDEN JBrowse
GO BP
GO CC
GO:0005741 [list] [network] mitochondrial outer membrane  (36 genes)  IDA  
GO:0031966 [list] [network] mitochondrial membrane  (173 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
GO:0004843 [list] [network] cysteine-type deubiquitinase activity  (38 genes)  IDA  
GO:0008233 [list] [network] peptidase activity  (312 genes)  IDA  
KEGG
Protein NP_001190965.1  NP_001320167.1  NP_568058.1 
BLAST NP_001190965.1  NP_001320167.1  NP_568058.1 
Orthologous [Ortholog page] LOC7456283 (ppo)LOC9266560 (osa)LOC11428939 (mtr)LOC100802492 (gma)LOC100813815 (gma)LOC101263107 (sly)LOC103835125 (bra)LOC123045468 (tae)LOC123053313 (tae)LOC123189213 (tae)LOC123426725 (hvu)
Subcellular
localization
wolf
mito 4,  nucl 3,  cysk 1,  chlo 1,  cyto 1,  plas 1,  cyto_plas 1  (predict for NP_001190965.1)
nucl 5,  mito 2,  cyto 1,  chlo_mito 1,  mito_plas 1  (predict for NP_001320167.1)
nucl 4,  mito 3,  chlo 1,  cyto 1,  plas 1,  cysk 1,  cysk_plas 1,  cyto_plas 1  (predict for NP_568058.1)
Subcellular
localization
TargetP
mito 7,  other 3  (predict for NP_001190965.1)
mito 7,  other 3  (predict for NP_001320167.1)
mito 7,  other 3  (predict for NP_568058.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with UBP27 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.2 AT4G15010 Mitochondrial substrate carrier family protein [detail] 827160
5.7 AT2G44420 protein N-terminal asparagine amidohydrolase family protein [detail] 819049
5.6 AT2G30710 Ypt/Rab-GAP domain of gyp1p superfamily protein [detail] 817622
5.6 VPS9A Vacuolar sorting protein 9 (VPS9) domain-containing protein [detail] 821514
Coexpressed
gene list
[Coexpressed gene list for UBP27]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252854_at
252854_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252854_at
252854_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
252854_at
252854_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 830092    
Refseq ID (protein) NP_001190965.1 
NP_001320167.1 
NP_568058.1 


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