[←][→] ath   AT4G39370 Gene
functional annotation
Function   ubiquitin-specific protease 27  
GO BP
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (436 genes)  IEA  
GO CC
GO:0031307 [list] [network] integral component of mitochondrial outer membrane  (19 genes)  IDA  
GO:0031966 [list] [network] mitochondrial membrane  (306 genes)  IDA  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0004843 [list] [network] thiol-dependent ubiquitin-specific protease activity  (42 genes)  IDA  
GO:0008233 [list] [network] peptidase activity  (526 genes)  IDA  
KEGG
Protein NP_001190965.1  NP_001320167.1  NP_568058.1 
BLAST NP_001190965.1  NP_001320167.1  NP_568058.1 
Orthologous [Ortholog page] LOC9266560 (osa)  LOC11428939 (mtr)  LOC100193497 (zma)  LOC100266433 (vvi)  LOC100802492 (gma)  LOC100813815 (gma)  LOC101263107 (sly)  LOC103651463 (zma)  LOC103835125 (bra) 
Subcellular
localization
wolf
mito 4,  nucl 3,  cysk 1,  chlo 1,  cyto 1,  plas 1,  cyto_plas 1  (predict for NP_001190965.1)
nucl 5,  mito 2,  cyto 1,  chlo_mito 1,  mito_plas 1  (predict for NP_001320167.1)
nucl 4,  mito 3,  chlo 1,  cyto 1,  plas 1,  cysk 1,  cysk_plas 1,  cyto_plas 1  (predict for NP_568058.1)
Subcellular
localization
TargetP
mito 7,  other 3  (predict for NP_001190965.1)
mito 7,  other 3  (predict for NP_001320167.1)
mito 7,  other 3  (predict for NP_568058.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with UBP27 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.5 UTR5 UDP-galactose transporter 5 [detail] 823761
5.5 AT2G44420 protein N-terminal asparagine amidohydrolase family protein [detail] 819049
5.3 AT1G67570 zinc finger CONSTANS-like protein (DUF3537) [detail] 843078
4.9 AT1G49350 pfkB-like carbohydrate kinase family protein [detail] 841358
4.0 AT5G60370 exonuclease V-like protein [detail] 836159
Coexpressed
gene list		 [Coexpressed gene list for UBP27]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252854_at
252854_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252854_at
252854_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
252854_at
252854_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830092      
Refseq ID (protein) NP_001190965.1 
NP_001320167.1 
NP_568058.1 


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