[←][→] ath   AT4G39780 Gene
functional annotation
Function   Integrase-type DNA-binding superfamily protein  
GO BP
GO:0009873 [list] [network] ethylene-activated signaling pathway  (191 genes)  IEA  
GO:0006355 [list] [network] regulation of transcription, DNA-templated  (1984 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA IC ISM  
GO MF
GO:0043565 [list] [network] sequence-specific DNA binding  (796 genes)  IBA  
GO:0044212 [list] [network] transcription regulatory region DNA binding  (871 genes)  IPI  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1599 genes)  ISS  
GO:0003677 [list] [network] DNA binding  (2280 genes)  TAS  
KEGG
Protein NP_195688.1 
BLAST NP_195688.1 
Orthologous [Ortholog page] DREB3 (sly)  DREB3 (gma)  AT2G22200 (ath)  AT1G22190 (ath)  RAP2.4 (ath)  LOC4330752 (osa)  LOC4331910 (osa)  LOC4340525 (osa)  LOC7456918 (ppo)  LOC7468904 (ppo)  LOC7471518 (ppo)  LOC7495144 (ppo)  LOC11437084 (mtr)  LOC25489428 (mtr)  LOC25501933 (mtr)  LOC100216971 (zma)  LOC100245515 (vvi)  LOC100253630 (vvi)  LOC100261438 (vvi)  LOC100274117 (zma)  LOC100280553 (zma)  LOC100502435 (zma)  LOC100781774 (gma)  LOC100797648 (gma)  LOC100800478 (gma)  LOC100802961 (gma)  LOC100815162 (gma)  DREB2 (gma)  ERF-H11 (sly)  ERF-H10 (sly)  LOC103637851 (zma)  LOC103644933 (zma)  LOC103830541 (bra)  LOC103832233 (bra)  LOC103835096 (bra)  LOC103852206 (bra)  LOC103853108 (bra)  LOC103862614 (bra)  LOC103864333 (bra)  LOC103869071 (bra)  LOC106796800 (gma) 
Subcellular
localization
wolf
nucl 8,  cyto_nucl 4,  chlo 1,  vacu 1  (predict for NP_195688.1)
Subcellular
localization
TargetP
other 9  (predict for NP_195688.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 5
Genes directly connected with AT4G39780 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.2 SERAT2;1 serine acetyltransferase 2;1 [detail] 842043
4.9 AT2G46690 SAUR-like auxin-responsive protein family [detail] 819281
4.8 AT3G60690 SAUR-like auxin-responsive protein family [detail] 825240
4.7 AT2G22200 Integrase-type DNA-binding superfamily protein [detail] 816754
4.4 bHLH104 basic helix-loop-helix (bHLH) DNA-binding superfamily protein [detail] 827086
4.2 AT3G18950 Transducin/WD40 repeat-like superfamily protein [detail] 821427
Coexpressed
gene list		 [Coexpressed gene list for AT4G39780]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252859_at
252859_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252859_at
252859_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
252859_at
252859_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830136      
Refseq ID (protein) NP_195688.1 


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