ATTED-II : GeneID search result

[←][→] ath At5g01230 Gene

functional annotation

Function

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

GO BP

GO:0030488 [list] [network] tRNA methylation	(9 genes)	IMP
GO:0042742 [list] [network] defense response to bacterium	(980 genes)	IMP

GO CC

GO:0005634 [list] [network] nucleus	(10305 genes)	IDA
GO:0005737 [list] [network] cytoplasm	(13880 genes)	ISM

GO MF

GO:0008175 [list] [network] tRNA methyltransferase activity

(6 genes)

IMP

KEGG

Protein

NP_568086.2 NP_851026.1

BLAST

NP_568086.2 NP_851026.1

Orthologous

[Ortholog page] LOC4342000 (osa) LOC7455223 (ppo) LOC11424755 (mtr) LOC100809923 (gma) LOC101251806 (sly) LOC103847498 (bra) LOC103871000 (bra) LOC123148587 (tae) LOC123159603 (tae) LOC123167862 (tae) LOC123410232 (hvu)

Subcellular
localization
wolf

nucl 9	(predict for NP_568086.2)
nucl 4, nucl_plas 3, cyto 2, plas 1, E.R. 1, chlo 1, mito 1, chlo_mito 1, E.R._vacu 1	(predict for NP_851026.1)

Subcellular
localization
TargetP

other 7, mito 5	(predict for NP_568086.2)
other 8	(predict for NP_851026.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03020	RNA polymerase	2

Genes directly connected with AT5G01230 on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
7.3	NRPE7	RNA polymerase Rpb7-like, N-terminal domain-containing protein	[detail]	827116
6.6	LpxA	bacterial transferase hexapeptide repeat-containing protein	[detail]	829075
6.3	AT3G04020	uncharacterized protein	[detail]	819557

Coexpressed
gene list

[Coexpressed gene list for AT5G01230]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

251139_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

251139_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

251139_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	830268
Refseq ID (protein)	NP_568086.2
Refseq ID (protein)	NP_851026.1

The preparation time of this page was 0.1 [sec].