[←][→] ath   AT5G01450 Gene
functional annotation
Function   RING/U-box superfamily protein  
GO BP
GO:0000278 [list] [network] mitotic cell cycle  (198 genes)  IMP  
GO:0009555 [list] [network] pollen development  (337 genes)  IMP  
GO:0016567 [list] [network] protein ubiquitination  (624 genes)  IDA IEA  
GO CC
GO:0009705 [list] [network] plant-type vacuole membrane  (124 genes)  IDA  
GO:0005768 [list] [network] endosome  (424 genes)  IDA  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (434 genes)  IDA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_195765.3 
BLAST NP_195765.3 
Orthologous [Ortholog page] APD1 (ath)  APD3 (ath)  APD4 (ath)  LOC7466072 (ppo)  LOC9269468 (osa)  LOC25490879 (mtr)  LOC25498753 (mtr)  LOC100247198 (vvi)  LOC100258653 (vvi)  LOC100777141 (gma)  LOC100791057 (gma)  LOC101252808 (sly)  LOC103855419 (bra)  LOC103857765 (bra)  LOC103867127 (bra)  LOC103867128 (bra)  LOC103867129 (bra)  LOC107280014 (osa) 
Subcellular
localization
wolf
cyto 6,  nucl 1,  chlo 1,  extr 1,  cysk 1,  nucl_plas 1  (predict for NP_195765.3)
Subcellular
localization
TargetP
other 6,  chlo 5  (predict for NP_195765.3)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with APD2 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.1 AT1G55590 RNI-like superfamily protein [detail] 842008
5.3 AT5G01960 RING/U-box superfamily protein [detail] 831906
5.3 AT5G35200 ENTH/ANTH/VHS superfamily protein [detail] 833474
4.9 AT2G30530 zinc finger CCCH domain protein [detail] 817602
Coexpressed
gene list		 [Coexpressed gene list for APD2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251086_at
251086_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251086_at
251086_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251086_at
251086_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 831860      
Refseq ID (protein) NP_195765.3 


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