[←][→] ath   At5g01450 Gene
functional annotation
Function   RING/U-box superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0000278 [list] [network] mitotic cell cycle  (86 genes)  IMP  
GO:0009555 [list] [network] pollen development  (376 genes)  IMP  
GO:0016567 [list] [network] protein ubiquitination  (434 genes)  IDA IEA  
GO CC
GO:0009705 [list] [network] plant-type vacuole membrane  (112 genes)  IDA  
GO:0005768 [list] [network] endosome  (350 genes)  IDA  
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (261 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_195765.3 
BLAST NP_195765.3 
Orthologous [Ortholog page] APD1 (ath)  APD3 (ath)  APD4 (ath)  LOC7466072 (ppo)  LOC7487320 (ppo)  LOC9269468 (osa)  LOC25490879 (mtr)  LOC25498753 (mtr)  LOC100777141 (gma)  LOC100791057 (gma)  LOC101252808 (sly)  LOC103855419 (bra)  LOC103857765 (bra)  LOC103867127 (bra)  LOC103867128 (bra)  LOC103867129 (bra)  LOC107280014 (osa)  LOC123063542 (tae)  LOC123096364 (tae)  LOC123173140 (tae)  LOC123446897 (hvu) 
Subcellular
localization
wolf
cyto 6,  nucl 1,  chlo 1,  extr 1,  cysk 1,  nucl_plas 1  (predict for NP_195765.3)
Subcellular
localization
TargetP
other 6,  chlo 5  (predict for NP_195765.3)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with APD2 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.4 AT1G55590 RNI-like superfamily protein [detail] 842008
5.8 EML1 Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein [detail] 820389
5.6 AT5G35200 ENTH/ANTH/VHS superfamily protein [detail] 833474
Coexpressed
gene list		 [Coexpressed gene list for APD2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251086_at
251086_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251086_at
251086_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251086_at
251086_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 831860      
Refseq ID (protein) NP_195765.3 


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