[←][→] ath   At5g01530 Gene
functional annotation
Function   light harvesting complex photosystem II  
GO BP
GO CC
GO:0010287 [list] [network] plastoglobule  (57 genes)  HDA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (315 genes)  HDA  
GO:0009534 [list] [network] chloroplast thylakoid  (415 genes)  HDA  
GO:0009579 [list] [network] thylakoid  (509 genes)  HDA  
GO:0005886 [list] [network] plasma membrane  (2529 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA ISM  
GO MF
GO:0016168 [list] [network] chlorophyll binding  (21 genes)  ISS  
GO:0003729 [list] [network] mRNA binding  (1535 genes)  IDA  
KEGG ath00196 [list] [network] Photosynthesis - antenna proteins (22 genes)
Protein NP_195773.1 
BLAST NP_195773.1 
Orthologous [Ortholog page] LHCB4.3 (ath)  LHCB4.2 (ath)  LOC4343583 (osa)  LOC7466067 (ppo)  LOC7487313 (ppo)  LOC7488015 (ppo)  LOC11406674 (mtr)  LOC11422473 (mtr)  LOC100785180 (gma)  LOC100785415 (gma)  LOC100794604 (gma)  LOC100820335 (gma)  LOC101249002 (sly)  LOC103850412 (bra)  LOC103866983 (bra)  LOC103870577 (bra)  LOC123044554 (tae)  LOC123052387 (tae)  LOC123188273 (tae)  LOC123425713 (hvu) 
Subcellular
localization
wolf
chlo 6,  vacu 1,  nucl 1,  mito 1,  extr 1,  golg 1,  E.R._vacu 1  (predict for NP_195773.1)
Subcellular
localization
TargetP
chlo 7  (predict for NP_195773.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 12
ath00196 Photosynthesis - antenna proteins 8
Genes directly connected with LHCB4.1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
18.2 PSBO1 PS II oxygen-evolving complex 1 [detail] 836789
17.9 LHCA3 PSI type III chlorophyll a/b-binding protein [detail] 842446
17.2 PSBP-1 photosystem II subunit P-1 [detail] 837178
16.8 LHCA2 photosystem I light harvesting complex protein [detail] 825320
15.2 PSAE-2 photosystem I subunit E-2 [detail] 816545
9.7 PSB27 photosystem II family protein [detail] 839449
Coexpressed
gene list		 [Coexpressed gene list for LHCB4.1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251082_at
251082_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251082_at
251082_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251082_at
251082_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830325      
Refseq ID (protein) NP_195773.1 


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