[←][→] ath   AT5G02250 Gene
functional annotation
Function   Ribonuclease II/R family protein  
GO BP
GO:0009658 [list] [network] chloroplast organization  (194 genes)  IMP  
GO:0006364 [list] [network] rRNA processing  (276 genes)  IMP  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (547 genes)  NAS  
GO CC
GO:0000178 [list] [network] exosome (RNase complex)  (17 genes)  IBA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  HDA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  IDA ISM  
GO MF
GO:0008859 [list] [network] exoribonuclease II activity  (3 genes)  IEA  
GO:0000175 [list] [network] 3'-5'-exoribonuclease activity  (32 genes)  IBA IDA  
GO:0003723 [list] [network] RNA binding  (1790 genes)  IEA  
KEGG
Protein NP_195845.2 
BLAST NP_195845.2 
Orthologous [Ortholog page] LOC4327498 (osa)  LOC7454930 (ppo)  LOC25491581 (mtr)  LOC100240818 (vvi)  LOC100803243 (gma)  LOC101247453 (sly)  LOC103651024 (zma)  LOC103847466 (bra) 
Subcellular
localization
wolf
chlo 8,  mito 2  (predict for NP_195845.2)
Subcellular
localization
TargetP
chlo 9  (predict for NP_195845.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with EMB2730 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.4 RIF10 polyribonucleotide nucleotidyltransferase [detail] 821181
8.3 EX2 UvrB/UvrC domain protein (DUF3506) [detail] 839642
8.0 AGY1 Albino or Glassy Yellow 1 [detail] 827922
7.9 AT5G03900 Iron-sulfur cluster biosynthesis family protein [detail] 831927
6.7 PPR2 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 819817
6.6 AT1G64430 Pentatricopeptide repeat (PPR) superfamily protein [detail] 842751
6.3 EX1 UvrB/UvrC domain protein (DUF3506) [detail] 829504
6.0 ABCG7 ABC-2 type transporter family protein [detail] 814660
5.5 AT5G09315 vacuolar sorting protein 9 domain protein [detail] 28721089
4.6 5PTase12 Endonuclease/exonuclease/phosphatase family protein [detail] 818994
Coexpressed
gene list		 [Coexpressed gene list for EMB2730]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251040_at
251040_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251040_at
251040_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251040_at
251040_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830864      
Refseq ID (protein) NP_195845.2 


The preparation time of this page was 1.7 [sec].