[←][→] ath   At5g02860 Gene
functional annotation
Function   Pentatricopeptide repeat (PPR) superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0009892 [list] [network] negative regulation of metabolic process  (1067 genes)  IEA  
GO:1901575 [list] [network] organic substance catabolic process  (1156 genes)  IEA  
GO:0009416 [list] [network] response to light stimulus  (1981 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (5004 genes)  ISM  
GO MF
KEGG
Protein NP_001332236.1  NP_001332237.1  NP_001332238.1  NP_001332239.1  NP_195906.1 
BLAST NP_001332236.1  NP_001332237.1  NP_001332238.1  NP_001332239.1  NP_195906.1 
Orthologous [Ortholog page] LOC4343774 (osa)  LOC7478642 (ppo)  LOC7478722 (ppo)  LOC25488998 (mtr)  LOC100796014 (gma)  LOC100813079 (gma)  LOC101245210 (sly)  LOC103833941 (bra)  LOC123044357 (tae)  LOC123052231 (tae)  LOC123188170 (tae)  LOC123425479 (hvu) 
Subcellular
localization
wolf
chlo 6,  nucl 1,  cyto 1,  plas 1,  vacu 1,  cysk 1,  cysk_plas 1,  cyto_plas 1  (predict for NP_001332236.1)
chlo 6,  nucl 1,  cyto 1,  plas 1,  vacu 1,  cysk 1,  cysk_plas 1,  cyto_plas 1  (predict for NP_001332237.1)
chlo 6,  nucl 1,  cyto 1,  plas 1,  vacu 1,  cysk 1,  cysk_plas 1,  cyto_plas 1  (predict for NP_001332238.1)
chlo 6,  nucl 1,  cyto 1,  plas 1,  vacu 1,  cysk 1,  cysk_plas 1,  cyto_plas 1  (predict for NP_001332239.1)
chlo 6,  nucl 1,  cyto 1,  plas 1,  vacu 1,  cysk 1,  cysk_plas 1,  cyto_plas 1  (predict for NP_195906.1)
Subcellular
localization
TargetP
chlo 5,  other 3  (predict for NP_001332236.1)
chlo 5,  other 3  (predict for NP_001332237.1)
chlo 5,  other 3  (predict for NP_001332238.1)
chlo 5,  other 3  (predict for NP_001332239.1)
chlo 5,  other 3  (predict for NP_195906.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT5G02860 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.9 AT2G26200 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [detail] 817160
7.9 AT4G26670 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein [detail] 828774
7.7 DG1 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 836893
7.1 OTP84 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 824910
6.8 SUV2 protein dimerization [detail] 834601
5.1 TRFL3 TRF-like 3 [detail] 838319
3.9 AT4G01670 uncharacterized protein [detail] 828109
Coexpressed
gene list		 [Coexpressed gene list for AT5G02860]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250987_at
250987_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250987_at
250987_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250987_at
250987_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 831761      
Refseq ID (protein) NP_001332236.1 
NP_001332237.1 
NP_001332238.1 
NP_001332239.1 
NP_195906.1 


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