[←][→] ath   AT5G03180 Gene
functional annotation
Function   RING/U-box superfamily protein  
GO BP
GO CC
GO:0005794 [list] [network] Golgi apparatus  (1430 genes)  ISM  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0008270 [list] [network] zinc ion binding  (554 genes)  IEA  
KEGG
Protein NP_001190212.1  NP_001330260.1  NP_001330261.1  NP_001330262.1  NP_568111.1 
BLAST NP_001190212.1  NP_001330260.1  NP_001330261.1  NP_001330262.1  NP_568111.1 
Orthologous [Ortholog page] AT3G09760 (ath)  AT5G60580 (ath)  LOC7491134 (ppo)  LOC11407485 (mtr)  LOC11427758 (mtr)  LOC25484020 (mtr)  LOC100257089 (vvi)  LOC100265508 (vvi)  LOC100782610 (gma)  LOC100783117 (gma)  LOC100787963 (gma)  LOC100788108 (gma)  LOC100789854 (gma)  LOC100811800 (gma)  LOC100815566 (gma)  LOC100815599 (gma)  LOC101249200 (sly)  LOC101256453 (sly)  LOC101265737 (sly)  LOC103845473 (bra)  LOC103850479 (bra)  LOC103851495 (bra)  LOC103859282 (bra)  LOC103870521 (bra)  LOC103870523 (bra) 
Subcellular
localization
wolf
plas 6,  nucl 2,  vacu 1,  E.R. 1,  E.R._vacu 1  (predict for NP_001190212.1)
plas 4,  nucl 2,  cysk_plas 2,  cyto_plas 2  (predict for NP_001330260.1)
plas 4,  nucl 2,  cysk_plas 2,  cyto_plas 2  (predict for NP_001330261.1)
plas 6,  E.R. 2,  nucl 1,  mito 1,  vacu 1  (predict for NP_001330262.1)
plas 6,  nucl 2,  vacu 1,  E.R. 1,  E.R._vacu 1  (predict for NP_568111.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001190212.1)
other 9  (predict for NP_001330260.1)
other 9  (predict for NP_001330261.1)
mito 5,  chlo 4  (predict for NP_001330262.1)
other 9  (predict for NP_568111.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT5G03180 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.1 TPR9 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 840233
4.8 TDP1 tyrosyl-DNA phosphodiesterase-like protein [detail] 831369
4.3 AT3G61420 BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins) [detail] 825315
Coexpressed
gene list		 [Coexpressed gene list for AT5G03180]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250938_at
250938_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250938_at
250938_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250938_at
250938_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 831897      
Refseq ID (protein) NP_001190212.1 
NP_001330260.1 
NP_001330261.1 
NP_001330262.1 
NP_568111.1 


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