ATTED-II : GeneID search result

[←][→] ath At5g03240 Gene

functional annotation

Function

polyubiquitin 3

GO BP

GO:0010224 [list] [network] response to UV-B	(75 genes)	IEP
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process	(230 genes)	ISS

GO CC

GO:0000325 [list] [network] plant-type vacuole	(785 genes)	HDA
GO:0005886 [list] [network] plasma membrane	(2529 genes)	HDA
GO:0005622 [list] [network] intracellular anatomical structure	(21148 genes)	TAS

GO MF

GO:0003729 [list] [network] mRNA binding

(1535 genes)

IDA

KEGG

ath04120 [list] [network] Ubiquitin mediated proteolysis (155 genes)

Protein

NP_001031824.1 NP_568112.2 NP_851029.1

BLAST

NP_001031824.1 NP_568112.2 NP_851029.1

Orthologous

[Ortholog page] UBQ11 (ath) UBQ10 (ath) UBQ14 (ath) UBQ4 (ath) UBQ9 (ath) UBQ12 (ath) UBQ13 (ath) LOC4328390 (osa) LOC4337080 (osa) LOC4341860 (osa) LOC7454416 (ppo) LOC7479088 (ppo) LOC7480065 (ppo) LOC7485436 (ppo) LOC9272016 (osa) LOC11421243 (mtr) LOC11422346 (mtr) LOC11429621 (mtr) LOC11431263 (mtr) LOC11434120 (mtr) LOC11443904 (mtr) LOC18095912 (ppo) LOC18100211 (ppo) LOC18100858 (ppo) LOC18106588 (ppo) LOC18106976 (ppo) LOC25492931 (mtr) LOC25501783 (mtr) LOC25502891 (mtr) LOC100127086 (tae) LOC100782546 (gma) LOC100791065 (gma) LOC100799042 (gma) LOC100800638 (gma) LOC100815545 (gma) LOC100817214 (gma) LOC100819694 (gma) LOC101256039 (sly) LOC101258282 (sly) ubq1-1 (sly) LOC103834437 (bra) LOC103838224 (bra) LOC103839752 (bra) LOC103839755 (bra) LOC103847397 (bra) LOC103858685 (bra) LOC103869289 (bra) LOC103874046 (bra) SUBI-2 (gma) LOC121173310 (gma) LOC121173311 (gma) LOC123046348 (tae) LOC123060969 (tae) LOC123102438 (tae) LOC123110611 (tae) LOC123114227 (tae) LOC123132003 (tae) LOC123132008 (tae) LOC123132200 (tae) LOC123132258 (tae) LOC123136238 (tae) LOC123136303 (tae) LOC123136436 (tae) LOC123136437 (tae) LOC123137854 (tae) LOC123138110 (tae) LOC123143542 (tae) LOC123143545 (tae) LOC123143811 (tae) LOC123143944 (tae) LOC123143945 (tae) LOC123143946 (tae) LOC123148995 (tae) LOC123149000 (tae) LOC123156106 (tae) LOC123162179 (tae) LOC123162180 (tae) LOC123162684 (tae) LOC123162685 (tae) LOC123164414 (tae) LOC123166192 (tae) LOC123182480 (tae) LOC123190093 (tae) LOC123190097 (tae) LOC123401164 (hvu) LOC123401278 (hvu) LOC123401304 (hvu) LOC123401361 (hvu) LOC123404241 (hvu) LOC123405651 (hvu) LOC123406377 (hvu) LOC123406997 (hvu) LOC123407022 (hvu) LOC123412478 (hvu) LOC123413120 (hvu) LOC123413417 (hvu) LOC123445590 (hvu) LOC123450040 (hvu) LOC123452560 (hvu)

Subcellular
localization
wolf

cyto 6, cyto_nucl 5, chlo 2	(predict for NP_001031824.1)
cyto 6, cyto_nucl 5, chlo 2	(predict for NP_568112.2)
cyto 6, cyto_nucl 5, chlo 2	(predict for NP_851029.1)

Subcellular
localization
TargetP

other 8	(predict for NP_001031824.1)
other 8	(predict for NP_568112.2)
other 8	(predict for NP_851029.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04120	Ubiquitin mediated proteolysis	6

Genes directly connected with UBQ3 on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
10.5	UBQ4	ubiquitin 4	[detail]	832184
7.3	UBQ13	ubiquitin 13	[detail]	842845
7.2	AT4G27130	Translation initiation factor SUI1 family protein	[detail]	828821

Coexpressed
gene list

[Coexpressed gene list for UBQ3]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

250935_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

250935_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

250935_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	831899
Refseq ID (protein)	NP_001031824.1
	NP_568112.2
	NP_851029.1

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