[][] ath   AT5G03560 Gene
functional annotation
Function   Tetratricopeptide repeat (TPR)-like superfamily protein
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (4405 genes)  ISM  
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO MF
GO:0015391 [list] [network] nucleobase:cation symporter activity  (4 genes)  ISS  
KEGG
Protein NP_001154694.1  NP_001318470.1  NP_001331042.1  NP_568123.1 
BLAST NP_001154694.1  NP_001318470.1  NP_001331042.1  NP_568123.1 
Orthologous [Ortholog page] LOC11412925 (mtr)LOC100256219 (vvi)LOC100272969 (zma)LOC100789181 (gma)LOC101244998 (sly)
Subcellular
localization
wolf
chlo 5,  mito 4,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for NP_001154694.1)
chlo 5,  mito 4,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for NP_001318470.1)
chlo 5,  mito 4,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for NP_001331042.1)
mito 6,  chlo 3,  cyto_mito 3,  mito_plas 3  (predict for NP_568123.1)
Subcellular
localization
TargetP
mito 6,  chlo 4  (predict for NP_001154694.1)
mito 6,  chlo 4  (predict for NP_001318470.1)
mito 6,  chlo 4  (predict for NP_001331042.1)
mito 6,  chlo 5  (predict for NP_568123.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00020 Citrate cycle (TCA cycle) 2
ath01200 Carbon metabolism 2
Genes directly connected with AT5G03560 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
5.7 CUTA Nitrogen regulatory PII-like, alpha/beta [detail] 817940
5.5 TIM23-1 translocase of inner mitochondrial membrane 23 [detail] 838327
5.2 SDH3-1 succinate dehydrogenase 3-1 [detail] 830819
4.4 AL5 alfin-like 5 [detail] 832173
Coexpressed
gene list
[Coexpressed gene list for AT5G03560]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250896_at
250896_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250896_at
250896_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
250896_at
250896_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 831789    
Refseq ID (protein) NP_001154694.1 
NP_001318470.1 
NP_001331042.1 
NP_568123.1 


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